Gene Rpic_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1838 
Symbol 
ID6286332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1927660 
End bp1928046 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content57% 
IMG OID642625400 
Productcopper resistance protein CopC 
Protein accessionYP_001899406 
Protein GI187928919 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.413816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000522971 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGAACA ATCGTTACAT CGCAAGCATT GCGGTCGCGG CATCGGCCAT TTTCGCCAGC 
ACGGCCGCAT TCGCCCATCC TAAGCTGCTG TCTTCGACGC CTGCCGACAA AGCGGAGGTC
GCCGCGCCGG CAAAGATCGA ACTCAAGTTC TCGGAAAATC TCTCGACGCA ATTCTCGGGA
GCAAATCTCG TTATGACTGA GATGCCTGGC ATGTCCGGTC ATGACGCCAT GAAAGTCGCC
GCGAAAGTCG CTGCCGGCGA TGACCCCAAG ACGATGGTGA TCACGCCCGC ACAGCCGCTG
ATGACGGGTA CGTACAAGGT CGAATGGCGT GCTGTCTCGT CGGATACGCA CCCGATGTCG
GGGAACTTCT CGTTCAAGGT GAAGTAA
 
Protein sequence
MLNNRYIASI AVAASAIFAS TAAFAHPKLL SSTPADKAEV AAPAKIELKF SENLSTQFSG 
ANLVMTEMPG MSGHDAMKVA AKVAAGDDPK TMVITPAQPL MTGTYKVEWR AVSSDTHPMS
GNFSFKVK