Gene Rpic_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1836 
Symbol 
ID6289361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1926205 
End bp1926693 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content61% 
IMG OID642625398 
Productprotein of unknown function DUF411 
Protein accessionYP_001899404 
Protein GI187928917 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.190449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000714625 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACAC CGTTGAGCTC GCAACCTATA TCCACGTCTA GGCGATCCCT GGTCGTCGGC 
CTGGCTCTCT TGCCTGCCAT AGCTTTGGCG CAGAAGTCTG AACCTAAGCC TACAGTCCAG
GTTTGGAAGA CGCCGGGTTG TGGATGCTGC AAGGATTGGT TGTCCCACCT GCGGGACAAC
GGATTCGATG TAGTCGCACA TGACGTCGAG GACACCGTCG AGGCACGGCG CACCGCAGGC
ATTCCCGATC GCTATGCTTC GTGCCATACG GCCGCCGTGC AGGGCTACGC CTTGGAAGGC
CATGTGCCCG CGCGCGAAGT CAGGCGCCTG CTGCGGGAGC GCCCTAAGGC AATCGGGCTG
GCGGTCCCCA GCATGCCCAT CGGCGCACCT GGCATGGACG GTCCGGCGTA CGGTAATCGA
CGTATGCCGC ACAGCGTGTT GCTGATCGGT TTGGATGGAA CATCCACCGT GTTCCAAGCG
TACAGTTGA
 
Protein sequence
MTTPLSSQPI STSRRSLVVG LALLPAIALA QKSEPKPTVQ VWKTPGCGCC KDWLSHLRDN 
GFDVVAHDVE DTVEARRTAG IPDRYASCHT AAVQGYALEG HVPAREVRRL LRERPKAIGL
AVPSMPIGAP GMDGPAYGNR RMPHSVLLIG LDGTSTVFQA YS