Gene Rpic_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1833 
Symbol 
ID6288161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1923302 
End bp1923781 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content55% 
IMG OID642625395 
Productblue (type 1) copper domain protein 
Protein accessionYP_001899401 
Protein GI187928914 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4454] Uncharacterized copper-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00584393 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAATT TCACTCGTTT CATCCCAGCA CTGATTTTTG TGCCTTTAGT CGCCTTGGGT 
GCGGCGAATC ACCTCGCCGG CCTAGACGCC AATTCCGGCG GGCCCGCACC CAAAGCGGGC
CAACCCGGAG ATCCTCGAAA GGTGACGCGT ACCATCAGTG TGACCATGAG CGATGACATG
CGTTTCCAAC CGATCACGCT CACCGTCAAA GTGGGCGAGA CCGTGCGTTT CGTTGTCAAG
AACCTTGGCA AGGTACACCA TGAAATGGTG ATCGGCACCG CCGCCGACTT AAAAGAGCAT
GTCGAGATGA TGCGCAAGAT GCCGGAGATG GACCACACTA CTGGAAAACA TCTCTCGCTC
GAGCCTGGCC AGCAGGGAGC AATCATCTGG CGATTCGGTG AACCCGGCAT TATTGACTTT
GCTTGCCTGG TACCGGGGCA TTACGAAGCC GGAATGATCG GAAAGATTGT GGTCAAATAG
 
Protein sequence
MNNFTRFIPA LIFVPLVALG AANHLAGLDA NSGGPAPKAG QPGDPRKVTR TISVTMSDDM 
RFQPITLTVK VGETVRFVVK NLGKVHHEMV IGTAADLKEH VEMMRKMPEM DHTTGKHLSL
EPGQQGAIIW RFGEPGIIDF ACLVPGHYEA GMIGKIVVK