| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1825 |
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| Symbol | |
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| ID | 6289419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1915633 |
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| End bp | 1917333 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625387 |
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| Product | integrase family protein |
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| Protein accession | YP_001899393 |
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| Protein GI | 187928906 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0271537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC GTCTGCTTCC CGTTGATTCT GCGATTGTCG CGCCACTTGG CTTGCCCGAT
GCCGCCGAAC TGGCTGTGCT GCGCGCCTGG CATGCGGGCT TATCGGCGCG CAAGGCTGTC
GAACGCTATC TCGGTGAGCG GCGGGCGCTC GGACAATCTT CGCGCGGCAT TCTCGGCCGC
ATCCGGCGCC AGCTAGCAGC GTTTGCGCGC CAGCGTCAGC GCGAAGACCT GGTGGTGCTG
TTCGAGATGC CAGCGGCCGA CCGTGCAAAA CAGGGCAGGG CAGCCGACCA AGCAATCGAA
CTGCTTCGCA CGCTACCGCT GCCAGCCCCG CTCATCAGCG ATGACGTCGG ACTGTGGCTG
GATGCACGCG CCGTCGCCGC GCTACGGGCC GCGGGCATCG ACACCCTTGC GGACCTGACC
GTGCGCGTGC CGCGTCGACG CCGCTGGTGG GTGGTCATTC CCGGGCTGGG CCAGGCCAGC
GCGCGGCGCA TCGAGGCTTT CTTCGCTGAC CACCCGCGTC TGACAGAGCG CGCTCGGACG
CTCATCGCCG AGCAAGCTCG CGGAGTGGTG GTGCCCTGGG AGCAACTGCG CTTACCACAC
GAGGTCGATG GCTCGCGAGG GCAATTCCGG GCGCCACGAG AGACCTGCGT CCTCTCAGCC
GACGACGATT ACGAGGCTGT GCAGGCATGG CTTTCCCTGC ATGAATCGCC AGCGACGCAG
CGCGCCTACC GGAAGGAAGC GGAACGTCTC ATCTTGTGGG CGATCATCGA GCGTGGCAAA
CCTCTGTCCT CGCTGACTAC CGAGGATGCG GTTGCATATC GAAGCTTCCT GCGGCGACCA
GCGCCACGTG AACGCTGGGT TGGGCCCGCA CGGCCACGCA CTTCGGTCGA GTGGCGGCCC
TTGACGGATG GATTGTCGGC GCACTCGATC GCGTATGCGC TGTCAGTGTT GGGCGCCATG
TTTCGCTGGC TGATCCAGCA GCGCTATGTG TTGGCCAATC CGTTTGCAGG TCTGAAGGTC
CGGGGTGCAA TACGCTCACC CGAGTTGGCC ACTTCTCACG CATTCTCGGA AGGGGAGTGG
GTGCTGGTCC GCACCATCGC TGACGGGCTG GAGTGGTCCT ATGGCTGGGC TGTACCTGCT
GGGCAGCGTC TGCGCTTCGT GCTCGATTTC TCCTATGCTA CCGGGCTGCG CGCGAGCGAA
CTCGTCACGT CGAAGCTGGG GGACCTGGAA GTGGATGCGG CCGGCGACCA CTGGCTGAAC
CTCGTGGGCA AAGGCCGCCG TGCGGGCAAA GTCGCGGTGC CACCGCTGGC ACGCAGCGCG
CTGGATCGGC ACCTTGTGGA GCGAAGCTTG CCGGTCAGCG TCGCACGGTG GAATCCTCAA
GTGCGGCTCA TTGGTGCTGT GGTAGGGGAG TCAGAAACCG GCATCACGAC GGCGCGCCTA
TGGGCCGTGG TGCGGCGCTT CTTTTGGACG GCCGCCGAGA TTATCGAACC CGATCATCCG
GCGCTTGCGC AGAAACTGCG CCAGGCGAGC CCGCATTGGA TGCGGCATAC CCACGCGACG
CACGCGTTGG CCCGTGGCGC GGAGCTCACG ACCGTACGGG ACAATCTGCG GCACGCCTCG
ATCTCGACCA CCTCGATCTA TCTGCATGGC GACGACGTAA AGAGAGCGCG GCAACTTACG
GCTGCGTTTG GGCGACGCTG A
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| Protein sequence | MKTRLLPVDS AIVAPLGLPD AAELAVLRAW HAGLSARKAV ERYLGERRAL GQSSRGILGR
IRRQLAAFAR QRQREDLVVL FEMPAADRAK QGRAADQAIE LLRTLPLPAP LISDDVGLWL
DARAVAALRA AGIDTLADLT VRVPRRRRWW VVIPGLGQAS ARRIEAFFAD HPRLTERART
LIAEQARGVV VPWEQLRLPH EVDGSRGQFR APRETCVLSA DDDYEAVQAW LSLHESPATQ
RAYRKEAERL ILWAIIERGK PLSSLTTEDA VAYRSFLRRP APRERWVGPA RPRTSVEWRP
LTDGLSAHSI AYALSVLGAM FRWLIQQRYV LANPFAGLKV RGAIRSPELA TSHAFSEGEW
VLVRTIADGL EWSYGWAVPA GQRLRFVLDF SYATGLRASE LVTSKLGDLE VDAAGDHWLN
LVGKGRRAGK VAVPPLARSA LDRHLVERSL PVSVARWNPQ VRLIGAVVGE SETGITTARL
WAVVRRFFWT AAEIIEPDHP ALAQKLRQAS PHWMRHTHAT HALARGAELT TVRDNLRHAS
ISTTSIYLHG DDVKRARQLT AAFGRR
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