| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1804 |
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| Symbol | |
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| ID | 6286380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1893894 |
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| End bp | 1896314 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642625367 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001899373 |
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| Protein GI | 187928886 |
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| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
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| COG ID | [COG2217] Cation transport ATPase
[COG3350] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.75515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATC AACGATCGCA TCCGCAGACG CCATCCCCTG CACCCGGCCA CGTCAAAGGT
GTGGAATGCG GAAATTCGTG CACAGAAGGT GGGGGCCATC AGCATGCCAC AGCGAAGCGA
CTGACGCTCG TGACCGCCAT TGAGGAGCGG GACCCGGTAT GCGGCATGAC AGTGAAGCCC
AATACGCCGT ACCAGTCTAG CTACGCGGAG ACCCGGTACG GCTTCTGCAG TACAACATGC
CAGCGGAAGT TCGATGCGGA CCCCAAGCTG TACACGCATT CGCAGGTCGC CTCCGCTGCT
GACGACGCCA ACGCGGCGCC GGACACCGTC TACACCTGCC CGATGCACCC CGAGATCCGC
CAAGACCATC CCGGGAATTG TCCGAAGTGC GGCATGGCGC TTGAGCCCGC AATGCCGAGT
CTTGAAGCGG ATGAGAATCC CGAACTCGCG GCGTTCCGCC GGCGCTTCTG GTGGACCTTG
CCGCTGACGA TCGCTGTCGT TGCGCTGGTG ATGCTGGGGG GGCGTGTCAC AGGAGTGGCC
CCGGCAGCGC AAGGCTGGGT GGAGTTTGCA TTGTCCGCGC CGGTGGTCTT GTGGGCCGGC
TTCCCCATCT ATACCCGGTG CCTGCAATCG TTCCGCAATC GCAGCCCGAA CATGTGGACG
CTGATCGGGC TAGGCACTGG CGCCGCGTTC GTGTACAGCG TTGCGGCCAC CGTGGCGCCC
GACCTGTTCC CCCGCAGCTT TGTTGTGCAT GGCCGCATTG CGGTCTACTT CGAAGCCGCT
GCCGTCATCA TTTCGCTCAC GCTGCTCGGC CAAGTTTTTG AACTCAAGGC GCGCTCGCAG
ACCTCGGCGG CCATCAAGTC TCTACTTGGT CTGGCACCCA AGACGGCACG CCGCCTCAAT
CCGGACGGCA GTGAAGAAGA CATCCCGCTT ACGCACGTGC ATGTCGGTGA CCTGCTGCGG
ATTCGCCCCG GCGAAAAGGT GCCAACCGAC GGCATCGTGA TGGAAGGGGC AAGTGCCATC
GACGAATCGA TGATCACCGG CGAGCCGCTG CCTGTTTCCA AGCGTGCTGG CGACCACGTG
ATCGGCGCTA CCCTCAATAC GTCGGGCAGT CTGGTGATGC GCTCGGAAAA GGTCGGCGCG
CAGACGGTGC TGTCGCAGAT CGTGCAGATG GTGGCCCAGG CGCAGCGCTC GAAGGCACCC
ATGCAGCGCA TGGCGGACCA GGTGGCCGGA GTGTTTGTGC TGGTGGTGGT GGCCATCGCC
GTGCTTGCTT TCTTTGGCTG GGGATTGTTC GGTCCCGAGC CGAGCTGGGT CTTTGGGCTG
GTCAATGCGG TGGCCGTGCT GATCATCGCT TGTCCGTGCG CGTTGGGACT GGCGACTCCG
ATGTCCATCA TGGTGGCGAG CGGCAAGGCG GCGACCCAGG GCATTCTGTT CCGGGATGCG
GCGGCTATCG AGCATTTCCG CAAGGTCGAC ACACTGATCG TCGACAAGAC CGGCACGTTG
ACCGAGGGCC GTCCGGTCTT CGAGCGCGCG TTGGCCGTCG ATTCGTTGGA TGAAACCGCG
GTGCTGCGCC TGGCGGCGAG TCTCGATCAG GGTAGCGAGC ACCCTCTGGC GGCCACCATC
GTTGCGGCAG CACGTGAGCG TGGCCTGACG TTGGGGAAGG CTGAACATTT CGCATCGGAC
GCGGGCATGG GTGTGCAGGG CCGGGTTGAC GGTCACCAAC TGATACTCGG CAACGCCTCC
CTGATGCGTC GGGAGCAGGT CGATATTGAA TCACAAGCGT TGCGGGCAAA CGTGCTGGGG
CAATACGGCG CCAGTGTCAT GTACCTGGCC GTAGACCGGA AATTGGCGGG ACTGCTGGCG
GTCTCTGACC CGGTCAAGGC CAGCACCCCC GAAGCGCTTG CGGCGCTCAA AGCGGCAGGG
ATTCGCGTGG TGATGGCAAG CGGCGACAGC ACCGCGACAG CGCGAGCCGT GGCCGGCCCT
CTTGGCATTA GCGAAGTTCA CGGTGAGGTC AAACCGGCCG ACAAGCTGGC GCTGGTGGCA
AAACTCCAGA GCGAAGGCCA CGTGGTGGCA ATGGCTGGCG ACGGCATTAA CGATGCACCT
GCACTGGCCA AAGCCGACGT CGGCATCGCC ATGGGGACTG GAACCGATGT GGCGATGCAT
AGCGCCCAGG TCACACTGGT CAAGGGCGAC CTGCGCGGCC TTGCGCGCGC GCGGGAACTG
TCGCAAGCCA CCATTGCCAA TATGAAACAG AACCTGGGAT TCGCATTCGT CTACAACGCG
CTCGGGATAC CGTTGGCCGC CGGCCTGCTG TACCCGTTCA CAGGATGGCT GCTGTCACCA
ATGATCGCGG CCTTGGCCAT GAGCCTGAGT TCGGTATCGG TGATTTCCAA TGCGCTTCGG
TTGAGAGCGC AGGTGTTCTA G
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| Protein sequence | MNDQRSHPQT PSPAPGHVKG VECGNSCTEG GGHQHATAKR LTLVTAIEER DPVCGMTVKP
NTPYQSSYAE TRYGFCSTTC QRKFDADPKL YTHSQVASAA DDANAAPDTV YTCPMHPEIR
QDHPGNCPKC GMALEPAMPS LEADENPELA AFRRRFWWTL PLTIAVVALV MLGGRVTGVA
PAAQGWVEFA LSAPVVLWAG FPIYTRCLQS FRNRSPNMWT LIGLGTGAAF VYSVAATVAP
DLFPRSFVVH GRIAVYFEAA AVIISLTLLG QVFELKARSQ TSAAIKSLLG LAPKTARRLN
PDGSEEDIPL THVHVGDLLR IRPGEKVPTD GIVMEGASAI DESMITGEPL PVSKRAGDHV
IGATLNTSGS LVMRSEKVGA QTVLSQIVQM VAQAQRSKAP MQRMADQVAG VFVLVVVAIA
VLAFFGWGLF GPEPSWVFGL VNAVAVLIIA CPCALGLATP MSIMVASGKA ATQGILFRDA
AAIEHFRKVD TLIVDKTGTL TEGRPVFERA LAVDSLDETA VLRLAASLDQ GSEHPLAATI
VAAARERGLT LGKAEHFASD AGMGVQGRVD GHQLILGNAS LMRREQVDIE SQALRANVLG
QYGASVMYLA VDRKLAGLLA VSDPVKASTP EALAALKAAG IRVVMASGDS TATARAVAGP
LGISEVHGEV KPADKLALVA KLQSEGHVVA MAGDGINDAP ALAKADVGIA MGTGTDVAMH
SAQVTLVKGD LRGLARAREL SQATIANMKQ NLGFAFVYNA LGIPLAAGLL YPFTGWLLSP
MIAALAMSLS SVSVISNALR LRAQVF
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