Gene Rpic_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1792 
Symbol 
ID6289318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1886172 
End bp1888109 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content66% 
IMG OID642625355 
ProductProtein-disulfide reductase 
Protein accessionYP_001899361 
Protein GI187928874 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.611458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTGGA GCGTGGCAGC GACGCGCACT GGAGGTGGCG GGCGAGTACG AGGCGTCGCC 
CCGGCACAGC TCGTTTTGCT GCTGCTCGCC GCCCTGTGGT TCTGCGTCAC AGGCACCGGT
GGTGTTGCCC ATGCTGCGGG CGAGCAAGAC CTCCTGCCAC CGGAGCAGGC TTTCCGCTTT
GCTGCGCGGC AACTCGAAGA CCGCTCCATC GAGGTGCACT TCGACATTGC CGACGGCTAT
CACCTCTACC GTGAGCGATT CGCATTCGCC GCACAGCCGG CAGGGGTCAA GCTCGGTACA
CCCGAATTTC CGCCAGGGCA GGTCAACTTT GACGAAGCGC TCGGCAAGCA GATGGAGACC
TATCATGGCG GGGTCACCAT TCGCGTGCCG GTGGCGGTCG CGCAGGTCGA CGGCAAATGG
TTGCTGACGG TGACGTCGCA AGGCTGTGCC GACAAGGGAG TCTGCTATCC GCCGATGCAC
AGTGTGTACA AGGTCGGCGG TGGCTCGCTC GGTGGCCTAT TCGACAAGCA TCGGAGCAGC
ACGCCAATGA CGTCGCCCGC GCCGCCGGCG ACGCCGACTT TGCCCAGCTT GGGAGGGGGG
CAAATTGGGC CTGCTGTTCC ATCAGCCGCG CCAAGGAATG ACGACGGCGA CCACATTGCC
CGCGTGCTGG CCAGCCGCCA GCTGGGCAAG ATTGTCACGG TCTTCCTCGG CTTTGGCCTG
CTGCTGACGC TCACGCCGAG CGCGCTGGCG ATGGTACTGA TCCTGTCGTC AATCGTCGTC
GGCGAGCACG TGACGCGCGT TCGCGCCTTG CTGGTTTCGT TTGCCTACGT GCTCGGAACG
GCAGTGGGTG TCGGCGCGGC AGCGGAATTG CTCGGCGAGA GACTTTCGGC GAGGCTGCAG
GCGCCGTGGG CGCTGGGGGC TTTTGCCGCG CTGGCGGTGG CCCTGGCGCT GTCAATGTTC
GGGCTTTATG AGCTGGGGCG GCAGCTCCCA ACGACGGCGC CATCGAACCG GTGGTCGGGT
GGACGGATTG CCGTTGCCGC AGCATCGGGG GTGATTTCGA CGTTGGTCGT CGTGCGCAGC
GTGCCAGTGC CGCTGTCGAG CACGCTGGCC TATCTCAAGC AAACCGGTGA TGCCATTGGT
AGTGGCGGTG CACTATTCGG TCTGGCGATC GGCATGGGAG TGACGCTGGT GCTGGTCGGC
GTCGCTACCG GCTATCTTCT GCCGCGCGCT GGGCACTGGT TGATGGTGAC GAAGCGCTTC
CTGGGCTTCC TGCTGCTCGG CGAGGCGCTC TGGGCTGTCA GCCCGCTTTT GCCACCCTGG
GCATTGATGG CGGCGTGGGC CATGCTGCTG CTGATTGCCG CCGCCTTCCT GGGCGCCTTC
GATTCGCTTG GTCCAGAGCC GCGCAGCATG GCCCGGTTGG GCAAAGGCAT GGGCATGGTG
GCCGCGCTGG CAGGGGCGAT CCTGCTGGTC GGTCTGGCGT CCGGCGGACG GGATCTGCTC
CAGCCGCTGT CGCATCTGCG TGCTGGCCCG ATGGCACCCG CCTCCACTGC TGGCCCGGCG
CTGGTGCGCT TCGAGCGCAT CCGCTCCGTG GCCGAACTCG ACGCGCGCCT GGTGCAGGCC
GCCGCGGCCG GCAAGCCGGT GCTACTGGAT TTCTATGCCG ACTGGTGTGT CAGCTGCAAG
GAGATGGAAC GCTTGACCTT CAGCGATCCA AGAGTCCAGG CGCGGCTGGC GGGTGTTGTG
CTGCTGCAGG CCGACGTGAC ACGCAATACT GCCGACGATC GCATCTTGCT CAAACGCTTC
GGCTTGTTCG GCCCACCCGG CATCATCTTG TACGGTGCCG ACGGGCGTGA GAGCCCGGTG
CGGGTGATCG GCTTCCAGTC TGCAAGCCTT TTCCTCGACA GTCTCGCGAA AGCCTTCGGT
GACGACGGGA AGCGTTGA
 
Protein sequence
MGWSVAATRT GGGGRVRGVA PAQLVLLLLA ALWFCVTGTG GVAHAAGEQD LLPPEQAFRF 
AARQLEDRSI EVHFDIADGY HLYRERFAFA AQPAGVKLGT PEFPPGQVNF DEALGKQMET
YHGGVTIRVP VAVAQVDGKW LLTVTSQGCA DKGVCYPPMH SVYKVGGGSL GGLFDKHRSS
TPMTSPAPPA TPTLPSLGGG QIGPAVPSAA PRNDDGDHIA RVLASRQLGK IVTVFLGFGL
LLTLTPSALA MVLILSSIVV GEHVTRVRAL LVSFAYVLGT AVGVGAAAEL LGERLSARLQ
APWALGAFAA LAVALALSMF GLYELGRQLP TTAPSNRWSG GRIAVAAASG VISTLVVVRS
VPVPLSSTLA YLKQTGDAIG SGGALFGLAI GMGVTLVLVG VATGYLLPRA GHWLMVTKRF
LGFLLLGEAL WAVSPLLPPW ALMAAWAMLL LIAAAFLGAF DSLGPEPRSM ARLGKGMGMV
AALAGAILLV GLASGGRDLL QPLSHLRAGP MAPASTAGPA LVRFERIRSV AELDARLVQA
AAAGKPVLLD FYADWCVSCK EMERLTFSDP RVQARLAGVV LLQADVTRNT ADDRILLKRF
GLFGPPGIIL YGADGRESPV RVIGFQSASL FLDSLAKAFG DDGKR