Gene Rpic_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1791 
Symbol 
ID6289317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1885419 
End bp1886093 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content62% 
IMG OID642625354 
Productcytochrome c class I 
Protein accessionYP_001899360 
Protein GI187928873 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.147068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.48223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGAC GACTTGGTAT TCGAGCGATC ACGGTCACCT TGGTCTCACT TGTCTTTAGC 
GCGTCAGCTC TTGCCGAGAG TGACCTCGCG CGCGGCGCGC AAGCCGCCCG CGCCTGCATG
GCGTGCCATT CATTTGCGCC AGGCCGCCAC ATGACAGGCC CGAGCTTGGC GGGCGTTTTG
GGCCGCAAAG CAGGTACAGC GGACGGTTTC GCGCGCTATT CCGATGCCCT CAAGCAATCA
GGCCTGGTCT GGGACAAGCG AAACCTCGAT GCATGGCTCA AGAATCCGGC AGCGCTGGTG
TCGGGTAACG CGATGACCTT TCCCGGCATT GCCGATGCAC GCACGCGGGC CGATCTGATC
GCCTACCTTG AGGCAGTTTC CACGGGTCGC GTAAAGGTTC CTGATCGTGG CCTGCCGAAT
TTGAAGGAGT CCGATGCGGC GTCGCGGGTT ACCTCAATCC GCTTTTGTGA CGATGCCTAT
CGCCTCACCA CCGCCGACCG GAAGACTCAC GCCTTTTGGG AGTTCAACCT GCGATTCAAA
ACCGATGGCA GCGCTGCCGG CCCGGCTGCC GGTCAGCCTG TGCTGATCGG CACAGGCATG
CAGGGCGACC GCGCCGCCGT GGTTTTCGCA CGCCCCGAAG AAATCTCTGC CTTCATTCAG
AGGCGGTGTC CATAA
 
Protein sequence
MVRRLGIRAI TVTLVSLVFS ASALAESDLA RGAQAARACM ACHSFAPGRH MTGPSLAGVL 
GRKAGTADGF ARYSDALKQS GLVWDKRNLD AWLKNPAALV SGNAMTFPGI ADARTRADLI
AYLEAVSTGR VKVPDRGLPN LKESDAASRV TSIRFCDDAY RLTTADRKTH AFWEFNLRFK
TDGSAAGPAA GQPVLIGTGM QGDRAAVVFA RPEEISAFIQ RRCP