Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1780 |
Symbol | |
ID | 6288906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1877879 |
End bp | 1878565 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625344 |
Product | two component heavy metal response transcriptional regulator, winged helix family |
Protein accession | YP_001899350 |
Protein GI | 187928863 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.817023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.826624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGT TAGTCGTCGA GGACGAACCC AAGACCGGAG AGTACCTGCA GCAAGGCCTG ACTGAAGCCG GCTTCGTGGT AGATCTGGCC TGCAACGGCA CTGACGGCCG GCATCTGGCT ATGACCGGTG AGTACGACTT ACTGGTGCTG GATGTGATGT TGCCGGACGT CGATGGTTGG CAGATCGTCC AATCGTTGCG AGCCTCGGAA CAAGCAGTGC CGGTGCTGTT CCTGACCGCG CGCGACAGCG TGGCAGACCG CGTCAAAGGA CTCGAACTGG GTGCTGACGA CTACCTGGTG AAGCCGTTCG CGTTTGCCGA GCTGCTGGCG CGGGTTCGCA CGCTGCTGCG CCGCGGAAAC AGCGCGGTCA CTGCCGACCG CATCCAGGTG GCCGATCTGG TGCTGGATCT TGCCCGCCGC CGCGCGTCGC GCGGTGGCCA GAAAATCCCG CTGACGAGCA AGGAGTTCTC GCTGCTCGAG CTGCTGGTTC GGCGCCGTGG CGAAGTCCTG CCGCGCTCGC TGATCGCCTC TCAGGTCTGG GACATGAACT TCGACAGCGA CACCAACGTG ATCGACGTCG CCATCCGCCG CCTGCGCGCA AAGATCGATG ATCACTTCGA GCCGAAGCTG ATCCAAACGG TGCGCGGCAT GGGTTATGTG CTCGAAGCAC CCGAGGAAGT GGCTTGA
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Protein sequence | MKLLVVEDEP KTGEYLQQGL TEAGFVVDLA CNGTDGRHLA MTGEYDLLVL DVMLPDVDGW QIVQSLRASE QAVPVLFLTA RDSVADRVKG LELGADDYLV KPFAFAELLA RVRTLLRRGN SAVTADRIQV ADLVLDLARR RASRGGQKIP LTSKEFSLLE LLVRRRGEVL PRSLIASQVW DMNFDSDTNV IDVAIRRLRA KIDDHFEPKL IQTVRGMGYV LEAPEEVA
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