| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1779 |
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| Symbol | |
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| ID | 6288905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1875868 |
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| End bp | 1877706 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642625343 |
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| Product | copper-resistance protein, CopA family |
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| Protein accession | YP_001899349 |
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| Protein GI | 187928862 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.976781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.472937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACA ATCGTGCATC CGGCCTCGTA CTGCCGAATC TGCCGCGACG GCGATTCGTG
CAAGGTTTGG CCGCCGGCGG GGTCATCGCC GGCTTGGGGC TGGCTGGCTT CACTTCGGCG
GCACCCGCTG CGTCCACCGC GCTGGGTACC GCCCCAGTGC TACGCGGCAC CGAATTCGAC
CTGGTGATCG ACGAGACGCC GGTGAACTTC ACCGGTAAGC CGGCCATGGC GACCACCATC
AACGGCATGC TGCCCGGGCC CACGCTGCGC TGGCGCCAGG GCGACACCGT TACGCTGCGC
GTGACCAACC GCTTGCGCGA GCCGACGTCG ATCCACTGGC ACGGCATCAT CGTGCCGTTT
CAGATGGACG GCGTGCCCGG CATCAGCTTT CACGGCATCC CGCCCGGCGA GACCTTCACG
TATCGCTTCA AGGTCCAGCA AAGCGGCAGC TACTGGTATC ACTCGCACTC GGGCTTCCAG
GAAATGACCG GGGTCTATGG TGGGCTCATC ATCGATGCCG CCGGCGGTGA CCCGATCCGC
GCGGATCGCG ATTACTCGGT TCTGCTCTCC GACTGGACCG ACGAAGATCC GATGCGCGTC
CTCTCCAAGC TCAAGAGACA GAGCGACTAC TACAACTACC ACCAGCCCAC AGTGGTGGAT
TTCTTCCGCG ACGTCTCCAA CGATGGCTGG AAAGCGGCCA TGGACAAGCG GAGCATGTGG
AACCAGATGC GCATGAATCC GACTGACCTG GCGGATCTTT CCGGCGCCAC ACTGACGTAC
CTGACCAACG GCGTCACACC TGCCGGCAAC TGGACGGGCC TCTTCGCGCC GGGGGAGACC
GTGCGGTTGC GCTTTATCAA CGGATCGGGC AACACGTTCT ACGACGTCCG CATCCCGGGG
CTAAAGCTCA AGGTAGTGCA GGTCGATGGG CAGAACATCG AGCCCGTCAC CGTTGACGAG
TTTCGCTTCG GCCCCGGCGA GACGTGCGAC GTGCTCGTTT CACCCAAGGA CGATGCCTAC
ACGATCTTCT CGCAGTCGAT GGATCGTACC GGCTACGCGC GCGGCACGCT GGCAGTTCGC
CAAGGCCTGC AGGCTGCAGT TCCCGCGCTC GACAAGGTCG AGTGGCTTTC GATGGCCGAC
ATGATGGGCG ACATGGGCGG AATGGGCCAC GCCGGCATGT CGGGCATGGA TCATGGTGGC
ATGCAGATGA TGGGCGATGG CGGCATGACC ACGATGGATT CCGGTGGCAT GACGATGATG
GGCGATGGCC AGCCTGCGGC ATCCAGCAGT GCGCCGGACA ATCTGAAGGT GCCGAGCAAG
AAGGCGCGGC ATGCGCGCAC GGAATATGGT CCGAGCACCG ACATGCACGT CGACATGGCT
CGCACCAATC TGGACGATCC CGGCATCGGG TTGCGTAACA ACGGACGGCG CGTCCTGGTG
CTTGCTGACA TGCATACCAT CGGCGGCCCC ATGGACAAGC GTGGTCCGGG GCGCGAGGTG
GAGCTGCACC TCACTGGCAA CATGGAGCGC TACACGTGGT CGATCGACGG TGTGGAGTTC
GGCAAGTCGA CGCCGGTGCA TTTCCAATAT GGCGAAAGGC TGCGGGTCAT CCTCCACAAC
GACACGATGA TGACCCACCC GATGCACTTG CACGGGATGT GGAGCGAGCT GGAAGCACCA
GACGGCACGT TCCTCGCGCG CCGGCACACC CTCCCTGTCC AGCCTGCCCA GCGGATCAGC
TTTCTGGTCA CAGCAGACGC GCTGGGTCGC TGGGCGTGGC ACTGCCATCT GATGTTGCAC
ATGGACGCGG GTATGTTCCG CGAAGTGGTG GTGGCCTGA
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| Protein sequence | MRNNRASGLV LPNLPRRRFV QGLAAGGVIA GLGLAGFTSA APAASTALGT APVLRGTEFD
LVIDETPVNF TGKPAMATTI NGMLPGPTLR WRQGDTVTLR VTNRLREPTS IHWHGIIVPF
QMDGVPGISF HGIPPGETFT YRFKVQQSGS YWYHSHSGFQ EMTGVYGGLI IDAAGGDPIR
ADRDYSVLLS DWTDEDPMRV LSKLKRQSDY YNYHQPTVVD FFRDVSNDGW KAAMDKRSMW
NQMRMNPTDL ADLSGATLTY LTNGVTPAGN WTGLFAPGET VRLRFINGSG NTFYDVRIPG
LKLKVVQVDG QNIEPVTVDE FRFGPGETCD VLVSPKDDAY TIFSQSMDRT GYARGTLAVR
QGLQAAVPAL DKVEWLSMAD MMGDMGGMGH AGMSGMDHGG MQMMGDGGMT TMDSGGMTMM
GDGQPAASSS APDNLKVPSK KARHARTEYG PSTDMHVDMA RTNLDDPGIG LRNNGRRVLV
LADMHTIGGP MDKRGPGREV ELHLTGNMER YTWSIDGVEF GKSTPVHFQY GERLRVILHN
DTMMTHPMHL HGMWSELEAP DGTFLARRHT LPVQPAQRIS FLVTADALGR WAWHCHLMLH
MDAGMFREVV VA
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