Gene Rpic_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1778 
Symbol 
ID6288904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1874870 
End bp1875868 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content61% 
IMG OID642625342 
Productcopper resistance B precursor 
Protein accessionYP_001899348 
Protein GI187928861 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3667] Uncharacterized protein involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.104151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.145157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACT TCCAACGCAG ATCAATCATG CGCAAGCACG CAAGGACATT GTTGACTGTA 
GCGCTGGCCG CCGCTGGCAT CGGAGCTGCC TCGGCTCAGG ACATCCAACT GATGAACGGG
GAGACTGCCC CGGCATCCCA ATCTGGGACC CAGAATACTG GCGGTTCAAT GCAAGGGATG
GACCATAGCT CAATGCAAGG GATGGACCAC GGCTCGATGC AGGGGATGGA TCACGGCAGC
ATGAACATGC AAGGCGGTTC GGCGCCACCC GATGCGCGCG ATCCCGATGC CTATTCGGGC
GGATACCAGC TCGGCACCGG CAAATACGCG CTGGGCGACC CCCGCCACAT GATGATGATG
GCGGACGCGC ACAACTTTGG CTCGGTGCTG GTGGACCGGT TGGAGTGGGT GCACGGTAAC
AATGCCAATG CAACGGCCTA CGAGCTGCAG GCTCGGTTCG GCAGCGCGTA CAACAAAGCT
GTCCTGAAAG CCGAGGGTGA CGTATCGAAG GGGCGCTTCG AAGAAGCGCG CACCGAATTG
CTATGGAGCC ATGCCGTAGC AACGTTCTGG GATACCCAGT TGGGGATTCG GAACGACGCG
GGCTTTGGCC GGCCCGCACG CAACTGGGTG GCGTTTGGCG TGCAAGGCTT GGCCCCGTAT
TGGTTTGACC TCGAAGCAAC GGCTTATGTG GGCAACAGCG GACGCACAGC ACTGCGCCTC
TCCAGCGAAT ATGAACTGTT GTTGACCCAG CGGCTGATTC TGCAACCGCG CATTGAAGCC
AACTTTTATG GCAAGCGCGA TCCGGATCTT GCCATCGGCA GTGGGCTTTC CAACGCGACG
GCCGGCTTAC GGCTGCGCTA TGAGTTCAGT CGCCAGTTTG CTCCCTATAT CGGTGTCGAA
CGCAGCCAGT CATTTGGCGG TACAGCCAAC ATGATCGAAG CGGCGGGCGG ACGTCGTGGC
GAGACCCGCT TCGTTGCGGG CGTGCGCCTC TGGTTCTAG
 
Protein sequence
MLDFQRRSIM RKHARTLLTV ALAAAGIGAA SAQDIQLMNG ETAPASQSGT QNTGGSMQGM 
DHSSMQGMDH GSMQGMDHGS MNMQGGSAPP DARDPDAYSG GYQLGTGKYA LGDPRHMMMM
ADAHNFGSVL VDRLEWVHGN NANATAYELQ ARFGSAYNKA VLKAEGDVSK GRFEEARTEL
LWSHAVATFW DTQLGIRNDA GFGRPARNWV AFGVQGLAPY WFDLEATAYV GNSGRTALRL
SSEYELLLTQ RLILQPRIEA NFYGKRDPDL AIGSGLSNAT AGLRLRYEFS RQFAPYIGVE
RSQSFGGTAN MIEAAGGRRG ETRFVAGVRL WF