Gene Rpic_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1776 
Symbol 
ID6288590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1873517 
End bp1874446 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content62% 
IMG OID642625340 
Productcopper resistance D domain protein 
Protein accessionYP_001899346 
Protein GI187928859 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1276] Putative copper export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0404803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.203133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG ATTGGCTCAA TATCGCCCTG CGCTTTGGGC TGTACCTGGA CTTGACGATC 
CTTTTCGGGG TCTCGCTGTT CGGGGTCCAG GCGTTGCGAC CCGATCACCG GGCCACGGCG
ATTGCGCGCC GATACGTCCG TGCCGTCGGA GTCACTGCCG CATTGGGCAT CGTGCTGTCG
CTCTGGAGCT TCATTGTGAT GGCGAAGGCG ATGACGGGGG CCACCGAGTA CGCTGAACTC
ACCAGCCATG TCTTCAGCAT GATGCTGACC ACCACCGCGG TTGGCCTGGC CTGGATGGCG
CGATTGGTGG CCCTGGCCGG ATGCTTGGTC GCCGTTGCGC GTTTGCGGAA GCACCCAGCG
CCTCACTTCG GCGTGTGCGC CGGGCTGGGT GCGGTGGCTC TGCTAACGGT CACTTGGGCC
GGGCATGGGG CGATGGACGA CGGTGTGAAG GGATACCTTC ATCTCGCATT CGATATCGCC
CACGTTTTGG CCGCTGGCGC CTGGGTTGGA GCATTGACGG CGTTTGTGCT GCTAGCGTCA
ACAAGGCAAG CGGCCTCATC GGAAGCCGTG GAAATCCTTA GTCATACATC CAATGGCTTC
GCGCGTCTTG GGACGCTGAT CGTTGCCACG CTGCTTTCGA CTGGGACGTT CAACTATCTT
TTGATTGTCG GGCCGACGAT TAACGGGCTG TTCTCCACGC TTTACGGGCG CTTATTGTTG
ATCAAGCTGG CCTTGTTCGC GCTGATGCTC GGCTTGGCTG CGGCCAATCG TTATCGGCTG
AGCCCGCGGC TTGAGGCGGC GGTTCGGGCC GCAGACCACG CCCATGCGGT GATGGCGTTG
CGTCGCAGCC TGGTCATGGA GACCAGTCTC GCCGTACTGA TTTTGGCGTT GGTCGCTTGG
CTTGGCGTGC TTTCGCCGCC TGGAACCTGA
 
Protein sequence
MADDWLNIAL RFGLYLDLTI LFGVSLFGVQ ALRPDHRATA IARRYVRAVG VTAALGIVLS 
LWSFIVMAKA MTGATEYAEL TSHVFSMMLT TTAVGLAWMA RLVALAGCLV AVARLRKHPA
PHFGVCAGLG AVALLTVTWA GHGAMDDGVK GYLHLAFDIA HVLAAGAWVG ALTAFVLLAS
TRQAASSEAV EILSHTSNGF ARLGTLIVAT LLSTGTFNYL LIVGPTINGL FSTLYGRLLL
IKLALFALML GLAAANRYRL SPRLEAAVRA ADHAHAVMAL RRSLVMETSL AVLILALVAW
LGVLSPPGT