Gene Rpic_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1768 
Symbol 
ID6287319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1866422 
End bp1866880 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content61% 
IMG OID642625332 
ProductMgtC/SapB transporter 
Protein accessionYP_001899338 
Protein GI187928851 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.313608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.363956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA TCATCCGCAC ATTGAGCTCG GAATTCTCCG ATCTCGCTAA TGCTGCCGAG 
GCAGTACGTG CCGTCGTTCG AATGACCGTC TCTATCGTTT TGGGGGGCTT GCTGGGGTAC
GAGCGGGAGA GCTCGGGAAA ATCCGCAGGC GTGCGCACTC ACATGCTCGT CGCGCTGGGG
GCATGCGTTT TTGTCGTGGT TCCCCTCCAG GCGGGCGTGC AGCTTGCCGA CATGAGCCGC
GTGCTTCAGG GTCTCACGTC AGGCATCGGA TTCCTTTGTG CAGGGGCGAT CCTGAAGCCG
GACAATGAGA CACACGTCAG GGGGCTCACA ACTGCCGCGA GCATCTGGAT TGCTGCCGCG
ATCGGCGTGG CCGCCGGCAT GGGCCATGCG GTGACGGCCA TCGTCGCGAC TGCCTTCGCA
CTCATCGTGC TCAGAATCCT TCAAATGTCG AAGAAGTAA
 
Protein sequence
MNDIIRTLSS EFSDLANAAE AVRAVVRMTV SIVLGGLLGY ERESSGKSAG VRTHMLVALG 
ACVFVVVPLQ AGVQLADMSR VLQGLTSGIG FLCAGAILKP DNETHVRGLT TAASIWIAAA
IGVAAGMGHA VTAIVATAFA LIVLRILQMS KK