Gene Rpic_1761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1761 
Symbol 
ID6286373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1857739 
End bp1858689 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content58% 
IMG OID642625325 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001899331 
Protein GI187928844 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0169574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.529338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAG GTCACTCACA CGACCATCCC GGTGGCAACG AGCGATCGCT CAAGATCGCC 
CTTGCGCTGA CCGGTACGTT CCTGATTGCC GAAGTGGTCG GTGGTGTCAT GACGAAGAGC
CTGGCGTTGA TCTCCGACGC CGCGCACATG CTCACGGACA CCGTCGCACT GGCCATCGCA
CTGGCTGCTA TTGCGATCGC CAAGCGACCC GCGGACAAGA AGCGGACATT TGGCTACTAC
CGTTTTGAGA TTCTTGCCGC GGCCTTTAAC GCATTGCTGC TGTTCGGTGT GGCTATCTAC
ATCCTGTACG AAGCCTACCT GCGGCTGAAA TCGCCACCTC AGATTGAGTC AACCGGCATG
TTCGTCGTGG CTGTGCTGGG CCTGATCATC AATCTCATCA GCATGCGCAT GCTGTCCTCC
GGGCAAAGCA GCAGCCTGAA CGTGAAGGGT GCTTATCTGG AAGTCTGGAG CGATCTGCTC
GGGTCGGTTG GCGTCATCGC CGGTGCGATC ATCATCCGCT TCACGGGCTG GGCGTGGGTC
GACTCCGCCA TTGCGGTGCT GATCGGCCTC TGGGTACTGC CTCGCACGTG GATCCTGCTG
AAGTCGAGCC TGAATGTGCT GCTCGAAGGC GTACCCGATG ACGTGGATCT GGCAGAGGTT
GAGAAGCAAA TTCTGGCGAC GCCCGGGGTA AAAAGCTTCC ATGACCTCCA CATCTGGGCA
CTTACCAGCG GCAAGGCGAG CTTGACGGTT CATGTCGTGA ATGACACGGC CGTCAACCCG
GAAATGGAAG TGCTACCGGA ATTGAAGCAG ATGCTGGCTG ACAAATTCGA TATCACGCAC
GTGACCATTC AGTTCGAACT GGCACCATGC GAACAAGCGG ATGCAGCTCA GCATTTCAAT
GCATCGCCAG CACTGGTCGG ATCGAAGTCG CTTGCTGCAG GAGGAAACTA A
 
Protein sequence
MGAGHSHDHP GGNERSLKIA LALTGTFLIA EVVGGVMTKS LALISDAAHM LTDTVALAIA 
LAAIAIAKRP ADKKRTFGYY RFEILAAAFN ALLLFGVAIY ILYEAYLRLK SPPQIESTGM
FVVAVLGLII NLISMRMLSS GQSSSLNVKG AYLEVWSDLL GSVGVIAGAI IIRFTGWAWV
DSAIAVLIGL WVLPRTWILL KSSLNVLLEG VPDDVDLAEV EKQILATPGV KSFHDLHIWA
LTSGKASLTV HVVNDTAVNP EMEVLPELKQ MLADKFDITH VTIQFELAPC EQADAAQHFN
ASPALVGSKS LAAGGN