| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1751 |
|---|
| Symbol | |
|---|
| ID | 6287142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1846746 |
|---|
| End bp | 1847867 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642625315 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_001899321 |
|---|
| Protein GI | 187928834 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.357367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCG CCAGCCTGCT GCCAGAGAAG ATCTCGGTCG TCGTACCGCT CTTCAATGAA
GAAGCTGTCC TGCCACAGTT TCACTTTCGG CTTCTCCGCG TGATGGATGG ATTGGCATCG
GACTACGAGA TTATCTACGT GGACGATGGC AGCCGCGATC GATCACTGGC GGTTGCACAC
AATCTCAAGG CGGCCGAAGC GCGCGTCGGC ATTGTCGAGC TGAGTCGCAA CTTCGGCAAG
GAAGCCGCGC TAACGGCGGG CCTCGACGTG GCAAGCGGCG ACGCCGTTGT GATCATCGAC
GCCGATCTGC AGGATCCGCC CGAACTGATT CCGTCGTTGA TCGAGAAATG GCGCGAGGGG
TTCGACGTGG TGTACGCCAC GCGCACTTCC CGGGATGGCG AATCGTTCCT CAAGAAGTTC
ACCGCGCACT GGTTTTACCG CCTGATGGGC AAGCTCAGCG ATACGGAGAT TCCGGCCGAC
ACCGGCGACT TCCGCGTCAT GAGCCGTCGT GCCGTTGCCG CACTCGGACA ACTCCGGGAG
CAGCACCGCT TCATGAAGGG GCTGTATGCC TGGATAGGAT TCCGGCAGAC GGCCGTCTTG
TATCGGCGTG ACGCGCGGGC ATCCGGGACG ACCAAGTTCA ACTACCGCAA GCTGTTGCGT
TTTGCCGTGG ATGGCATCAC TGCCTTTTCC ACCGTGCCGC TCAAGTTTGC AACCTCGATC
GGCCTGCTTG TTGCCGTTCC CGCCTTTGGC ATGGCCGCCT TCATCGTTGG CAAGACGCTG
CTCTACGGCG ACCCCGTACA CGGCTACCCA TCCATGATGA CCGCCCTGCT TCTGCTGGGC
GGCCTGCAAC TGGTTTTCCT AGGCGTGCTC GGGGAATATG TTGGGCGTCT GTTCAATGAA
GTCAAGCGGC GGCCGGTGTA TCTGGTGGCA AGCTATACGG CGCCGATCGG CCCCGGCACC
CCCACCGCTG AGCCGGGGCA GGTGGCCGCA GCGACACGGG GTGGCACCCC GCCTGCAGCA
ATCTTTCACG CACCCGGATG CCCGGAAGGC AAAGCTCCTG GCCTCCCCGA GGCTCCTCAG
CGGGATGCCA TCCTCACGGA AACCCTTGCG CCAAGCCGAT AG
|
|---|
| Protein sequence | MNAASLLPEK ISVVVPLFNE EAVLPQFHFR LLRVMDGLAS DYEIIYVDDG SRDRSLAVAH
NLKAAEARVG IVELSRNFGK EAALTAGLDV ASGDAVVIID ADLQDPPELI PSLIEKWREG
FDVVYATRTS RDGESFLKKF TAHWFYRLMG KLSDTEIPAD TGDFRVMSRR AVAALGQLRE
QHRFMKGLYA WIGFRQTAVL YRRDARASGT TKFNYRKLLR FAVDGITAFS TVPLKFATSI
GLLVAVPAFG MAAFIVGKTL LYGDPVHGYP SMMTALLLLG GLQLVFLGVL GEYVGRLFNE
VKRRPVYLVA SYTAPIGPGT PTAEPGQVAA ATRGGTPPAA IFHAPGCPEG KAPGLPEAPQ
RDAILTETLA PSR
|
|---|
| |