Gene Rpic_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1749 
Symbol 
ID6288181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1844762 
End bp1846369 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content60% 
IMG OID642625313 
Productglycosyl transferase family 39 
Protein accessionYP_001899319 
Protein GI187928832 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.327651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGA CCATCGCACT CACGGTGGTC CTCTGGATGT CCACGCTATC CGTGCGTCCC 
CTCTATGAAC CCGACGAGGG TCGTTACGCC GAGGTTCCGC GCGAGATGTT CGTCTCCGGC
GATTGGGTCA CGCCGCGGTT GAACGGCATC AAGTTCTTCG ACAAGCCGCC CCTGCAGTAT
TGGGCGACCG CCAGCGCCTA TACGCTCTTC GGGCCGTCCG AGTGGACAGC AAGGATCTGG
AGTGCGCTTG TGGGACTGCT GGGCGCACTC GCCGCATGGT GGGCGGCGCG ATCGCTCTAT
GACACGCGCA TAGGCCTCGC CTCAGCGCTG GTGCTCATCG GCGCTCCCCT CTGGATTCTC
GGCTCGAATC TGACAACAAC AGACATTGGT GTCGGCGCAC TGCTCGGCAG TGCCGCTCTC
GTTTTCGCCG TGGCCTACCA GAATCGGGAA CCTCGCTTAT ACCCCCTGAT CTGGTTGTTG
GTCGGTCTGG CATTTCTTGC CAAAGGCCTG ATTGCCCTGG TACTGCCAGG AATCACGCTG
CTGCTATACG GGGCGGTCAC TCGACAATTT TCCGCATTTT TTAGCGCGAG ATTCTGGCGC
TGGAGCCTGC TTGCGGTGGC CATCACCATG CCTTGGTTTG TCGTGGTGTC CCAGCGCAAC
CCCGAATTTC TGAATTACTT CTTCATCCAC GAACACTTCG CGAGATTCTC GTCCTCGGTT
CACGAGCGGG ACAAGCCATT CTGGTTCTTC CTGGCCGTTG GTGCGGCAGG CGTCCTGCCG
TTCATGGGCT TGATTCCCCG TGCTATCGCA CTCCGCTCTC GCAGCGCACA GGCAACGCCT
GGCTTCGACG CACGACTGTT TCTGTCGCTG TGGGTAGTCG TTGTCATTGC CTTCTTTTCG
ATTTCGCGCT CGAAGCTGCC GCTCTATATC CTGCCCGCCT TACCACCGGT GGCCGTCTTG
CTCGCGTACA GATCCATGAC TGCAGCCCGC CCCACACTGG CGGCAAGCTT TCTTGCCATG
CCTGTGCTCG GCGTTGCCAT CGCCGTGCTG CTATGGCATC CGACAATGTC GAATGCGGTA
CTGAAGCTCA ATATCAGCAA TCCGGCCTCA TTGCATACCT GGGGCGCCAT CACGATGGGC
ATTCTGGTCA TCGGTGGCTT CCTGGCCTTT GGGATCGCCC TGCGCGGCCA CAGGCTCTGC
GCGGTTGCCG TCGCTTCGCT GGCGACGCTG GCCAGCCTTC AGGCTGGCTT GATGGCGTCT
CGGGCGTTTG GGTCCCTCTC CATCAAACCA CTTGGCTTGG AAGCCAAGGC GGCGTCCCGC
GACAACACAC AACTGTTCAA CGTGGGCCAG ATTGACCGAG GTCTGGCGTT TTACGCCGAA
CGAGAACCGA TCATTGTCGG GGCCAGATCC GAGCTGGATC TCGGCTTCTC GGTCGAGCCC
GACAAGTGGA TTGCTAATGA AGAAGCTTTT GCGCAGCGAT GGCTGACCCC TGGTCACAAG
CTCGCGGTCA TGCGGCACGA GACGTTTCAT CGACTGAGAC CGCTGCTCGG CGGCAACACA
ACTGTGATCG GACGACATGG CGTCAACGTT CTGGTGCAAA AACCATGA
 
Protein sequence
MALTIALTVV LWMSTLSVRP LYEPDEGRYA EVPREMFVSG DWVTPRLNGI KFFDKPPLQY 
WATASAYTLF GPSEWTARIW SALVGLLGAL AAWWAARSLY DTRIGLASAL VLIGAPLWIL
GSNLTTTDIG VGALLGSAAL VFAVAYQNRE PRLYPLIWLL VGLAFLAKGL IALVLPGITL
LLYGAVTRQF SAFFSARFWR WSLLAVAITM PWFVVVSQRN PEFLNYFFIH EHFARFSSSV
HERDKPFWFF LAVGAAGVLP FMGLIPRAIA LRSRSAQATP GFDARLFLSL WVVVVIAFFS
ISRSKLPLYI LPALPPVAVL LAYRSMTAAR PTLAASFLAM PVLGVAIAVL LWHPTMSNAV
LKLNISNPAS LHTWGAITMG ILVIGGFLAF GIALRGHRLC AVAVASLATL ASLQAGLMAS
RAFGSLSIKP LGLEAKAASR DNTQLFNVGQ IDRGLAFYAE REPIIVGARS ELDLGFSVEP
DKWIANEEAF AQRWLTPGHK LAVMRHETFH RLRPLLGGNT TVIGRHGVNV LVQKP