Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1741 |
Symbol | |
ID | 6287679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1835821 |
End bp | 1837206 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642625305 |
Product | heavy metal sensor signal transduction histidine kinase |
Protein accession | YP_001899311 |
Protein GI | 187928824 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.300317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.393073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCC GTATGTCGCT GACCATGCGG CTGACGTTGT TGTTTTCTCT GACGTCGGCA TTGGTGCTAC TTGGCCTCGG AATACTGATC TGGCTTTCCA TGGACCGGCA TTTTGCCGAC GAAGATTATG TGGTGCTTGG GGACAACGTT CGTCTGATTC AAAAGATCGC TCAGGAGCAA TCCAGCACGC ACCTGCCGAG CCGTCTTGCG GAAATGGTGG AACATCACCC CGGTTTTGTC GCCCATGTGA GCACCGCGAA AGGTGACGTC ATTTACCGCA CCAATGGGTT CGATTTTGGC GCCATGCTCA ACGTTATTGG CCGGCTTGGA CCGGATGAGA CGACCTTGAG CTGGCAGCAG GGAGACAAGG AATACCGAGG TATGCGCGCG CACGCGACAG TGCCCGGCGA GTCGGTGCCC TTGGCGGTGA TGGTCGGCAT GGACACCGAA ATCCATGCCC ACTTTATGCA CGCGTTTCGT CGCTCGCTGG CCTTCTATAC CACGTTGGCG GTGCTCGCCA GCGGCTTGTT CGGCTGGTGG GCAGCCAGGC GCGGTCTGGC GCCGTTGCGA ACGATGGCCT CTCGCGCCAA GGGTGTCACG TCGAATCACC TTGACGCCCG CATGCCCGTG GAGACCGTGC CGGTGGAGAT GGCCGATCTG GCGGCGACGC TGAATGCCAT GCTCGAGCGC TTGCAGGACG ATTTCCGGCG ATTGTCCGAA TTCTCGTCCG ACCTGGCTCA CGAATTGCGC ACGCCGATCA CCAACCTGAT GACCCAGACC CATGTCGTGT TGTCGCAGCC GCGCGAGGCC GCCAAGTACC GCGACGTGTT GGCCTCCAAC GCCGAGGAGC TGCTGCGCCT TGGCCGCATG GTGTCCGATA TGCTTTACTT GGCCAAGATG GAGCACGGCA TCACGCTGCC CAACGAGGAG TCGATCCATG TCGGCGACGA GGCCCGCGCG CTGTTTGATT TCTACGACGC CTTGGCCGAG GACAAGGGTG TGCAGCTGCG CCTGCAGGGC GACGCCAGCA TCGTGGGCGA TCGCCTGATG TTGCGCCGCG CACTGAGCAA TCTGCTGTCG AACGCACTGC GGTATACGCC CAGCGGCAAA GCGATTGTGA TCAAGGCATG CGAGCAAGAC GGCGGCGCCA CCATCGTGGT CGAGAACCAG GGCGAGGGGA TCGATCCCGA GCTGTTGCCG TCGTTGTTCG ACCGGTTCTT TCGGGCCGAC AAGTCCAGGG CGCGCGCTGA TTCGGACAGC GTGGGGCTTG GCTTGTCGAT CACGCAAGCC ATCATGGTGG CGCACCGCGG TGGAATCTCG GCTGAGTCGT CAGGCGGTCT CACCCGCTTT ATTCTGACCT TCCCGCGGCG CCAGCCACGA GCTTAG
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Protein sequence | MKRRMSLTMR LTLLFSLTSA LVLLGLGILI WLSMDRHFAD EDYVVLGDNV RLIQKIAQEQ SSTHLPSRLA EMVEHHPGFV AHVSTAKGDV IYRTNGFDFG AMLNVIGRLG PDETTLSWQQ GDKEYRGMRA HATVPGESVP LAVMVGMDTE IHAHFMHAFR RSLAFYTTLA VLASGLFGWW AARRGLAPLR TMASRAKGVT SNHLDARMPV ETVPVEMADL AATLNAMLER LQDDFRRLSE FSSDLAHELR TPITNLMTQT HVVLSQPREA AKYRDVLASN AEELLRLGRM VSDMLYLAKM EHGITLPNEE SIHVGDEARA LFDFYDALAE DKGVQLRLQG DASIVGDRLM LRRALSNLLS NALRYTPSGK AIVIKACEQD GGATIVVENQ GEGIDPELLP SLFDRFFRAD KSRARADSDS VGLGLSITQA IMVAHRGGIS AESSGGLTRF ILTFPRRQPR A
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