| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1728 |
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| Symbol | |
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| ID | 6287255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1822578 |
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| End bp | 1823156 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642625292 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001899298 |
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| Protein GI | 187928811 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.747406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACT TCCGTCTGTT TATTGCGCTC GATCCCACGC CCGAGACGGT TGCGGTCTTG
CGGCGCGCGC AGGTCTGTCT GCGGGACGTT CACTGGAGTG GGGCGCGTTG GCTACCCCCG
GAACAATGGC ACGCAACGCT ACGCTTCTTG GGGGCAACGC CTGAGGATCA GGTGCAGCAC
TGGAAGCGCA CGCTGCAGCA GTTCGACGTG CTCGCCCGGG ATGCAGCGCC ACTGCCGATC
GACGGCGTTG CAATCTGGCC AGCGCCAGCG CACCCCCGTG TGATCGTGGT CACCGCGAAG
TGCGCCATAT GGGCGCAGGA TATGGCGACG CGCTTGGAGG CCCGCGCGCG CGCGGCCGGC
TATCGCGCGG AAACTCGAGC ATTTCACCCG CATGTCACGC TCGCGAGAGT TGGCGTACAT
GCGGCATCTG CGCGATGCTT GGCCGCGGTG GACAATGCCG CCCGGGCGCT CGATGGCGCG
CACCTGCAGT TCGGCAGCGT CTCTCTGTTT GTCAGTCGGT CGCCGGCGGA GGGGCCAGCC
TATGAGAGGC TGGCGACCAT GGAGTTTCGC CCGAACTGA
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| Protein sequence | MSNFRLFIAL DPTPETVAVL RRAQVCLRDV HWSGARWLPP EQWHATLRFL GATPEDQVQH
WKRTLQQFDV LARDAAPLPI DGVAIWPAPA HPRVIVVTAK CAIWAQDMAT RLEARARAAG
YRAETRAFHP HVTLARVGVH AASARCLAAV DNAARALDGA HLQFGSVSLF VSRSPAEGPA
YERLATMEFR PN
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