| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1714 |
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| Symbol | |
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| ID | 6287744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1807866 |
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| End bp | 1809173 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642625278 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001899284 |
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| Protein GI | 187928797 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.297905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAATC AATCGTCCGC CACTCCCGCA CCCCTCGATG CGCGGGCCGT CAGGCCAGCG
TTGGTCGTGC TGCTTGCTCT GGTATTTGTT GTCTCTCTCG GCTATGGAGT CGGGCTGCCG
TTGCTGCAGT TGTATCTGGC GCAGTACCTG CCTGGTGCGA CGCGGCAAAC GCTGGCGTGG
CACGTTGGCA TGCTGGGAGG AATCTACACG CTCGCGCTGT TCATCTTTGC GCCGTGGTGG
GGCCGCCAGT CGGATCATCG TGGGCGGGCG GCGGCGCTGA CTACCGGCTT CGCTATGTTT
GTGCTGGGAA CCGCGATGGT CGCGCTAATA CCCAGTCTCA TGGCGATCTA TGGCGGTCGA
TTGATCGCCG GGGCGGGGGC AGCGGCTATC GTGCCCGGTG CCCAGGCCTA TGTGACCGAC
ATCAGCAATA CCGAGGACAG GAGTCGGCGC TTTGTGCTGA TCGGTAGTGC ATCGTTCGTT
GGCTTTCTCG CGGGCCCCGC GTTCGGTAGT TGGCTTGCCG GGCCGCTGAT GGGCATGCCT
GCAGGCCAGA TGCCCAGTAT GGTCAACTGG CCCGCGTTGG TGGTCGCATC GGTCGGACTG
CCACTTCTGT TGGCGGTTCG CCGCTGCCTG AGCACGACCA AGCCGATCTT GCTCGACAGC
GGCTCGGTGC AGATGACCCG GCAGCGCAAG CGCTTCGTTG CTGTATCGAT GCTGTTAGCC
CTGCTGGCGT CCTTTGCCGC AGGTACCTTC GAAGTCGGCT TCAGCCTGTT TGGTGGCCAG
ACACTGCGCC TACCCAACTC GATGATTGCG GTGATGTTTG TCACGTGCAG CCTGGCGATG
CTCGCCGCGC AGGCTTTGCT GCTGCTTCCG GCAGTGCGCA AGCATATCGA CCATCGCTGG
GTTGCCGGCG CATTTGCCGG CTCAGCGGTG GCACTGGGCT TTGCCGCACT GGTGCCCGAT
GCCGCCGCGC TTGGGCTGCT AATCGCCGTG GTGGCTACCG GCGTCGGCAT GATTGGACCG
GTGCTGTCTT ATGAGTTGCT GGAAGGTGAC CGTAGTTTCG CTGGGTCGCT GTTGGCAAGG
CAGGCAGCCG CAGGCAACCT GGGGCAGGCA CTAGGTTCGG TGAGTGCCGG TACCCTGTTT
GGATGGAATA CGTTCGCTCC ATTTTGGGCA GCGGCGGCTG TGTTGCTGCT TGGTAGTGTG
GCTGCACTGC GTTGGTGGGG CGCGGCGCGG CAGGCTGAAC GTCAGCCAGA GCAGCGCAGC
TTTCAAGCAG AAGGAGAAAG GCAGACGAGG GAAGGGCGGG GCGCATGA
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| Protein sequence | MLNQSSATPA PLDARAVRPA LVVLLALVFV VSLGYGVGLP LLQLYLAQYL PGATRQTLAW
HVGMLGGIYT LALFIFAPWW GRQSDHRGRA AALTTGFAMF VLGTAMVALI PSLMAIYGGR
LIAGAGAAAI VPGAQAYVTD ISNTEDRSRR FVLIGSASFV GFLAGPAFGS WLAGPLMGMP
AGQMPSMVNW PALVVASVGL PLLLAVRRCL STTKPILLDS GSVQMTRQRK RFVAVSMLLA
LLASFAAGTF EVGFSLFGGQ TLRLPNSMIA VMFVTCSLAM LAAQALLLLP AVRKHIDHRW
VAGAFAGSAV ALGFAALVPD AAALGLLIAV VATGVGMIGP VLSYELLEGD RSFAGSLLAR
QAAAGNLGQA LGSVSAGTLF GWNTFAPFWA AAAVLLLGSV AALRWWGAAR QAERQPEQRS
FQAEGERQTR EGRGA
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