| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1711 |
|---|
| Symbol | |
|---|
| ID | 6287360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1803419 |
|---|
| End bp | 1804762 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642625275 |
|---|
| Product | Cyclopropane-fatty-acyl-phospholipid synthase |
|---|
| Protein accession | YP_001899281 |
|---|
| Protein GI | 187928794 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0226099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCA CCAAGGCATT TATTGGCAGC GTTCCTTCGA CCGACACCGA GCCGGCGCTA
CGCATCCTGC GTCGGTTGCT CGCTGGGATG GAGAAGCCGC CCGCACTGCG GCTGTGGAAC
GACACGCTGC ACGGGCACGA TACGGCGGTC GATTTCACGT TGGTGGTGCG GGACCCCAGC
CTGTTGCGTC AGTTGGTGGT GGCGCGCAGT CCCCTTTTAT TGGCTGACGC GTACTTTCGG
GGCGTGCTCG ACATCGAGGG AGACCTGTAC GGCGCGCTCC GGTTGAAGAA CCATTTCGAG
TCGATCCAGT TGTCGTGGCG CGACAAGCTC GCGCTGTTAA AGGACGCGTT AATGCTGCCC
GCTCCGGACC TGGGTGAGAT CAAACCGGAT GCGGGCTTCG CATCCCGGGT CGCCCGGCGC
TTCGCGCACC GGCATTCGCG CCACAGCGAT CGCGCCGCGA TCTCGTTCCA CTATGACGTG
TCCAACAAGT TCTATGGGTT GTGGCTGGAC GAGGAGCGGG TGTACTCCTG CGCCTACTTC
GAGCAGCCCT CCGATTCGCT GGACACGGCG CAGCGCAACA AGCTTGAGCA CGTTTGCCGC
AAGCTGCGCC TGCGGCCCGG CGAACGGCTG CTGGATATCG GCTGCGGCTG GGGGGCGCTC
GTATGTTGGG CCGCGCGCGA GCACGGTGTG CACGCCCACG GCATCACCCT AAGCGAGCGA
CAGCTCGAAT ACGCCCGCGA GCGCATTCGG ATCGAAGGGT TACAGGATCG CGTCACGGTG
GAGTTGCGCG ATTACCGTGA TCTGGAAGGC GAGGGTGTCT ACGACAAGGT TTCCAGCATC
GGGATGTTCG AGCACGTCGG CCTGCGCAAC CTGCCGGCCT ACTATGCGGT GGTGCGTCGG
ATGCTCAAGC CGGGCGGCCT ATTCTTGAAC CACGGCATCA CGCACGACGA GGAAGGGTGG
AACAAGACAG CTGCCACCGA GTTCATCAAT CGCTATGTAT TTCCCGACGG CGAGCTTGAT
TGCATCAGCA ACATCCAACT CGGCATGGAG CGCGCGGGCT TTGAGATCCA TGACGTCGAG
GGACTGCGCC CGCACTACGC GATGACCTTA CGGCACTGGG TGCATCGCCT GGAGGCTCAG
CGCGATGCGG CGATCGCTGA AGTTGGAGAA GCCGCCTATC GCGTCTGGCG CCTGTACATG
GCGGCCTGCG CGTTGGAGTT CGAGGCCGGT GGCTCCGGCA TCTATCAAAT CCTGGCGTCC
AATCGCCACC CGGGTAAATG GCCTGTGCCG ATGACACGGC GTGATCTGTA CCGCAGTCGA
CCGCATTGGG ATTGGGGGAA CTAG
|
|---|
| Protein sequence | MNSTKAFIGS VPSTDTEPAL RILRRLLAGM EKPPALRLWN DTLHGHDTAV DFTLVVRDPS
LLRQLVVARS PLLLADAYFR GVLDIEGDLY GALRLKNHFE SIQLSWRDKL ALLKDALMLP
APDLGEIKPD AGFASRVARR FAHRHSRHSD RAAISFHYDV SNKFYGLWLD EERVYSCAYF
EQPSDSLDTA QRNKLEHVCR KLRLRPGERL LDIGCGWGAL VCWAAREHGV HAHGITLSER
QLEYARERIR IEGLQDRVTV ELRDYRDLEG EGVYDKVSSI GMFEHVGLRN LPAYYAVVRR
MLKPGGLFLN HGITHDEEGW NKTAATEFIN RYVFPDGELD CISNIQLGME RAGFEIHDVE
GLRPHYAMTL RHWVHRLEAQ RDAAIAEVGE AAYRVWRLYM AACALEFEAG GSGIYQILAS
NRHPGKWPVP MTRRDLYRSR PHWDWGN
|
|---|
| |