| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1709 |
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| Symbol | |
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| ID | 6286517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1800860 |
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| End bp | 1802374 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625273 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001899279 |
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| Protein GI | 187928792 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAACC CTCGCCACAG GGCAAGTCTT GCCGTGCGTC GGATGGGCAT CGAGACGCAG
CAGGAATATG TCGTCTACAT GCATCGAGAC TGCCATGTTT GCCGCTCCGA GGGTTTCGAG
GCGCAGACGC GAGTACTGAT TAGCCTGAAC GGACGCTCGA TCATCGCCAC GCTGAACGTT
GTCGATCCGA CCTTGCTGGA GTTGGGGGAG GCGGCGCTTT CGAACAGCGC GTGGCGAGCG
CTGGCGCCCG CGCCGGGCGA CCGGATCACG ATCTCGCATG CCCCGACGCT GGACTCAATG
AGCCAGGTGC GGGCGAAGAT CTACGGCCAC AGGCTCGACG CGTCGGCTCT GGACTCGATC
ATTAGTGACG TCGCCGCTGG CAGCTACCCT GGGACACATA TCGCCGCTTT TCTAAGCGCC
TGCGCCGGCG GGCGGATGGA TTTGCAGGAG ACGATCGATC TGACGCGAGC GATGCTGGCC
GCGGGCAAGC GGCTCGACTG GGGGCATGCA CCGATCGCGG ACAAGCACTG TGTGGGTGGA
TTGCCGGGAA ACCGCACGAC GCCGATTGTC GTGTCGATCA TCACCGCGGC CGGGCTCACG
ATGCCGAAGA CGTCGTCAAG GGCCATTACC TCGCCGGCTG GCACCGCCGA CGTGATCGAA
ACGATGACGC CGGTGGCGCT CGATTTGGAG CAGATGCGCC GCGTTGTCCA ACGCGAGGGC
GGCTGCTTTG TCTGGGGAGG CTCGCTGGCG CTCAGCCCGG CCGACGACAT GTTGATCCGC
GTCGAGCGCC CGCTGGACCT CGACAGCGAC GCGCAGCTCG TGGCATCTGT GCTGTCGAAG
AAGATCGCTG CCGGCGCTAC CCACTCCGTG ATCGATGTGC CGGTCGGGCC GACCGCCAAG
GTGCGCAGTG ACGCAGACTA CGAGTGCCTG AAGCAAATGC TGGAGCAGGT AGCGCAGGCC
TTTGATTTGC ACTTGCAGGT AGTGCGTACG GACGGGACGC AGCCGGTGGG CCGTGGCATT
GGTCCCTCAC TGGAGGCGCA CGACGTGCTG GCAGTCCTTC AGCGTGCCGA GCGCGCGCCC
GAGGATCTGA GCGTGCGCGC TGTCGCATTG GCTGGACAAC TGTTGGAATT TTGCGGTCAC
AGCGAGCCGG GTACTGGCGT CTTGGTCGCT CAGCGGTTGC TTGATAGCGG CGCCGCGTGG
GCCAAATTCC AGGCGATCTG CAAAGCGCAA GGGGGCTTAC GCGAGCCGCA GCGGGCGCGG
CTACGCGAGC CTGTGCTGGC CGAACGTGAC GGGATGGTAC GTGAGATCGA CAGCCGGCGG
TTGGCTCGCG TGGCCAAGCT CGCCGGGGCA CCGAAGGCAC CCGCTGCCGG GCTCGAACTG
CATGTCAAGC TGGGGGATCG CGTCGAGCGA GGTATGCCGC TGTTCACCGT GCATGCCGAA
GCGCTCGGCG AGTTGGACTA CGCGTTCGAC TACCTGGAGG CTCACCCGCT GATCGATGTG
GGAGATTCGA GATGA
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| Protein sequence | MRNPRHRASL AVRRMGIETQ QEYVVYMHRD CHVCRSEGFE AQTRVLISLN GRSIIATLNV
VDPTLLELGE AALSNSAWRA LAPAPGDRIT ISHAPTLDSM SQVRAKIYGH RLDASALDSI
ISDVAAGSYP GTHIAAFLSA CAGGRMDLQE TIDLTRAMLA AGKRLDWGHA PIADKHCVGG
LPGNRTTPIV VSIITAAGLT MPKTSSRAIT SPAGTADVIE TMTPVALDLE QMRRVVQREG
GCFVWGGSLA LSPADDMLIR VERPLDLDSD AQLVASVLSK KIAAGATHSV IDVPVGPTAK
VRSDADYECL KQMLEQVAQA FDLHLQVVRT DGTQPVGRGI GPSLEAHDVL AVLQRAERAP
EDLSVRAVAL AGQLLEFCGH SEPGTGVLVA QRLLDSGAAW AKFQAICKAQ GGLREPQRAR
LREPVLAERD GMVREIDSRR LARVAKLAGA PKAPAAGLEL HVKLGDRVER GMPLFTVHAE
ALGELDYAFD YLEAHPLIDV GDSR
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