| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1702 |
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| Symbol | |
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| ID | 6288683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1793426 |
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| End bp | 1795570 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642625266 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001899272 |
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| Protein GI | 187928785 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.575929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAGC CACGGCGCTT GCGCCCGCGC GCGCGGCCCC AATGTCGCGG GTTGATGAAG
GTCAACCTCG GCGATTTCCA AGCGTCAATA CTGGGAACGC ATACCAATGC GCGGTTGTCC
GGCGCCTACC CAGGCCGCCC ACCAACCTTC CCAGCATTGG AGACCAGACT CACTTTCAAT
AAGGTCGACT TGGAGAAGAA TCCCATGGAA CCGCGACAGC AACAGTTCTC CCTCTGGTAC
GTGCTCGTGA CCATACTGGC CATGCTTGCA ATCCAGACGC TCTTCGTGTC GGGGCATGTC
GAGACGATCC CATACAGCGA TTTCAAGGTC CTACTGAAGG CTGGCAAGCT CAAGGACGTG
GCTATTGGTG AGCAGGCTAT CAGCGGAACC TTCTCGACAG AAGGTATCGA CAATCTCCTT
GCCAAGCAGC AGATCGAGGA AATCCGCCGA GAGGCAAAGG GCGACCACGC CTTCTCCACG
CTTCGAGTGG CCGATCCTGA GCTGGTGCAG GAGCTCGAAG CGGCAAAGGT GCGCTTCGTC
GGGCAGCCCG ACAACAAATG GCTGAGCACG ATCCTCTCGT GGGTTGTGCC GGCCGTCATC
TTTTTCGGTA TCTGGAGCTT TCTCATCAAG CGCGTGGGCG GCGCCGCCGG CAGCATGATG
GAAATTGGCA AGAGCAAGGC AAAGGTCTAC ATGCAAAAGG AGACCGGCGT GACTTTTGCC
GACGTGGCTG GAATCGACGA AGCCAAGGAG GAGCTGTCGG AGATTGTTAG CTTCCTGAAA
GATCCTCAGC GGTACCAGCG CCTGGGCGGA AAAATTCCCA AGGGCGTGCT GCTGGTTGGG
GCCCCGGGCA CTGGCAAGAC CTTATTGGCA AAGGCCGTGG CAGGCGAAGC CGGCGTGCCA
TTCTTCAGCA TGAGCGGCTC CGACTTCGTC GAGATGTTCG TTGGTGTGGG TGCAGCACGG
GTCCGCGATC TCTTTAAGCA AGCCGAAACC AAAGCCCCCT GCATCATCTT CATTGATGAG
CTTGACGCAC TCGGAAAGAC GCGAGCACTG AATGCGGTCG GCGGCAACGA GGAGCGCGAA
CAAACACTGA ACCAGCTTCT GGTCGAGATG GACGGTTTTG ATAGCAACAA AGGCGTCATC
ATCATGGCCG CCACAAACCG ACCCGAGATA CTGGACCCCG CCCTGCTTCG CCCCGGTCGC
TTTGACCGCC ACGTCGCACT GGACCGGCCT GACCTCAAGG GACGGGAGCA GATTCTCAAA
GTTCACGTCA AGGGCGTTGT CCTCGCTCCT GAGGTCGACC TGACTAAACT CGCCGGACGG
ACCCCGGGGT TCGCAGGTGC CGATCTTGCC AACTTGGTTA ACGAAGCCGC GCTCCTTGCC
GCGCGCAAGA GCAAGCAAAT GGTCGAGATG GCAGATTTCG ACGAGGCGCT TGACCGGATC
GTCGGCGGCC TGGAAAAAAA GAACCGCGTG ATGAATCCGA AGGAGAAGGA AACTATCGCA
TTCCACGAGG CAGGACATGC CATCGTCGCG GAGCATCGGC CGCTGGCTGA CCGTGTCTCC
AAAGTTTCCA TCATTCCGCG GGGCGTTGCG GCGTTGGGTT ACACGCAACA GACCCCAACC
GAGGACCGCT ACCTGCTCAA GCGCAGCGAA CTGCTTGACC GGCTCGATGT CTTGCTCGGT
GGCCGTATTG CGGAACAGCT CATTTTCGGC GACGTATCCA CGGGCGCACA GAACGACCTG
CAGCGCGCAA CCGACATGGC TCGGCAGATG ATTACCCAGT TTGGCATGAG CGACCAGCTG
GGCCTGGCCA CGTACGAGAA TATGCCGAAC CCGCTCTTTG CTGGGACGGG GCTAATGCAG
CGCGAACGCA ATGAATACAG CGAGAGCACC GCACAGATGA TTGATGCTGA AGTCCGTAAG
CTATTGGCAG AAGCAAGTCA TCGCGTACAA GCGACGCTGG AAGGACAGCG GACCAAGCTC
GATGCTCTGG CCCAATTACT TCTCGAGAAG GAAGTGGTTG ACCGCCAAGA CCTGGACATG
TTTTTGTCAG CGAAGGTGAC GCCAATGCCT CCGCCCAAGC CCGTCGCGAA TATCGAGGAG
TCAACTGCAA CGGGGAAACC GGACCAAAAA ACGCAAGGCA CATAG
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| Protein sequence | MEKPRRLRPR ARPQCRGLMK VNLGDFQASI LGTHTNARLS GAYPGRPPTF PALETRLTFN
KVDLEKNPME PRQQQFSLWY VLVTILAMLA IQTLFVSGHV ETIPYSDFKV LLKAGKLKDV
AIGEQAISGT FSTEGIDNLL AKQQIEEIRR EAKGDHAFST LRVADPELVQ ELEAAKVRFV
GQPDNKWLST ILSWVVPAVI FFGIWSFLIK RVGGAAGSMM EIGKSKAKVY MQKETGVTFA
DVAGIDEAKE ELSEIVSFLK DPQRYQRLGG KIPKGVLLVG APGTGKTLLA KAVAGEAGVP
FFSMSGSDFV EMFVGVGAAR VRDLFKQAET KAPCIIFIDE LDALGKTRAL NAVGGNEERE
QTLNQLLVEM DGFDSNKGVI IMAATNRPEI LDPALLRPGR FDRHVALDRP DLKGREQILK
VHVKGVVLAP EVDLTKLAGR TPGFAGADLA NLVNEAALLA ARKSKQMVEM ADFDEALDRI
VGGLEKKNRV MNPKEKETIA FHEAGHAIVA EHRPLADRVS KVSIIPRGVA ALGYTQQTPT
EDRYLLKRSE LLDRLDVLLG GRIAEQLIFG DVSTGAQNDL QRATDMARQM ITQFGMSDQL
GLATYENMPN PLFAGTGLMQ RERNEYSEST AQMIDAEVRK LLAEASHRVQ ATLEGQRTKL
DALAQLLLEK EVVDRQDLDM FLSAKVTPMP PPKPVANIEE STATGKPDQK TQGT
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