| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1690 |
|---|
| Symbol | |
|---|
| ID | 6289636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1781426 |
|---|
| End bp | 1782646 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642625254 |
|---|
| Product | AAA ATPase central domain protein |
|---|
| Protein accession | YP_001899260 |
|---|
| Protein GI | 187928773 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCTC CCCGGCAACC TTCGGAGCAC CCACCTGGAT TTGTTCCTTT AGGGGATCTG
TCCGAGCAGC GTAGTGCGGC GGCATGGCAT CTGCTCATCC CCTCGAACAC GCACACCGTC
CTTGAGGCTG CCCGACAAGC CAAACTGGAC CTTGCGGTGA TAAAAGAAGA TGAGCATGAA
TCCTCATCTG CTGGACCGGC TGTGGCGACG CCGGCAGAAG TGGTTCCCGC TCCTCGCCGT
GCTCGGCCCC GGCATATTCA GGTTTTTGGG CCTGAAGCGC TGGCGCTCGC CAACGAGCAC
ATGCAAGGTG CAGACCGCAG CCAGCGGCGG TGCGCCGAGA CATTGTTGGA GCGAGCCGGG
AGCAATGAGG GCTACCGCGC ACTACCTCGT GTTCGATCTG CCCTGAAGAA GCTCGAAACG
GCGCGGAGCG TGTTCGGCAA CCTGAGTGAG CCGATTGAGA AGCTCAGGAT TGATCTCACG
TTGAACAGTG CGATGCGGAC AAAGGATTTC CGGATTCGGC CGATCCTGCT GACAGGACCA
CCAGGCATTG GAAAAACGCA CTTTGCGCTG AAGTTGGCAG AGCTTCTGAA TGTGCCAATG
CGGAAGTGGT CCGCTGGAAG TGCCCAGGCA AGCTTCCAAC TGACGGGCGG CGATAGCGCC
TGGCACAGCG CTCGACCTGG GATGGTTATT GAGATGCTCG CCCGTGGCAG CTCGGCGACG
CCTGTGCTCA TCTTGGACGA AGTGGACAAG ATTGGTAGCG ATGTCCGCTA CCCGGTAACT
CCTGTACTGC TGGATCTACT TGAGTCCGAG ACAGCAAGCA CATTCCAAGA CATGTTCTTG
CATATGGCGT TTGACGCCAG TCGGATCATC TACGTCCTGA CGGCCAATGA TCTCAACGCT
GTGCCTTCCC CGCTATTGAG CCGCGTAGAG GTGTTTGACA TCCCGGCACC TGAGCCCGAG
CAGCGGTTGC TGCTTGTTTT GGCGGAGGTG CAGCGGCTGC AGCGTGCCAC CGGCAAGCGC
ATTGAGTTGG ACGCCAGCGC GGCAGAAGCC TTGGCAGGAC GGAGCGACCT AGATCTGCGC
GCAACACATC GTTTGGTCCA GGATGCTTTT GCGACTGCGA TGGCATCAGG AAAGCACGTC
GCCGCGCCCA AGATGCCGCG GCGCGCCGGG CGGCAGGCGA TCGGCTTCGT GGCAGACCGA
CAATCTGGTG AGCGGGCCTA G
|
|---|
| Protein sequence | MSAPRQPSEH PPGFVPLGDL SEQRSAAAWH LLIPSNTHTV LEAARQAKLD LAVIKEDEHE
SSSAGPAVAT PAEVVPAPRR ARPRHIQVFG PEALALANEH MQGADRSQRR CAETLLERAG
SNEGYRALPR VRSALKKLET ARSVFGNLSE PIEKLRIDLT LNSAMRTKDF RIRPILLTGP
PGIGKTHFAL KLAELLNVPM RKWSAGSAQA SFQLTGGDSA WHSARPGMVI EMLARGSSAT
PVLILDEVDK IGSDVRYPVT PVLLDLLESE TASTFQDMFL HMAFDASRII YVLTANDLNA
VPSPLLSRVE VFDIPAPEPE QRLLLVLAEV QRLQRATGKR IELDASAAEA LAGRSDLDLR
ATHRLVQDAF ATAMASGKHV AAPKMPRRAG RQAIGFVADR QSGERA
|
|---|
| |