Gene Rpic_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1683 
Symbol 
ID6288247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1772562 
End bp1774244 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content59% 
IMG OID642625247 
Producthypothetical protein 
Protein accessionYP_001899253 
Protein GI187928766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCA TAAACGCGTT TCCAAAAAGG GAAGGCCGTT GGCGCGTGGA TTGGTTCGGC 
CCCATCGCCT TCCCCGATCG CATGGTGCGA CGGCGCCATC CGTCCGTTCT GGTCTCCTTG
TCCAAGGACA AGTGCCCTGA AGGCAGCAGT CGCTTATCGC TTCTCTCGCT CCGCGAAACC
GAAAGGCAGC AGACCCGATG CTGGGTTTCA GTCGGAACCA CAATGCTCCT GCGTATCGGC
GACGTGTGGC GCGAACAGAG CTTGGAATCC CGTGCCGCTG ACGAAGAACT GCATTGCGAG
AACCTGGAGA TCAGCCAGGA CACCTGCGAG CTAGTAAAAG CTGGATCGAG CTTCGAAGAC
GGCAGTTTCA TGCTGCCGCT CCATGAGCAT GCTGGACATC GCGAGAACAC GCACTCCTAT
TGCGTTCGAG TCACCTTGCC AGACGGGAAG CTCCTTGTCG TGCCCTGCAT GGAGTTGATC
CGTTTCTACT TCGGCTCGTC CAGTGAGCTC CTCAACAGGC TGTTCCACCC CCAACTCGAT
AGAGGGCATC TTTACACGGG GACGCCGGCA ATAGATCGGC ACAACCGGAT GACGCTTCAA
CTTGCCGACC GTATTCCGCG CGCAAGCGCC GAGGACGTCG CAAGAATCGC CGGCAGTCGG
CTGGCATGGC GCGCGGCCAA AATGATTGGA GCCTCCTGCG TACGCGCCGC TCAGGCTCGC
CAAGAGGTTT ACCCGCAGAC CCTATTTCCG TTCGAAGGAA CGACAACACT GCGAGCCGCT
GGGAAGTGGC TGTCGCGAGG CAATGATCCC AAAGGAACGT TCCTCGTCTA TCAACTCCTG
AGTTGCTCGC ACCCGTTCCC CTTCAAGTCA CTGCGGTTCC ATGTGACGGG TGGAAAGAAA
GCTCACACTA CCGGAATGGT GCCCGATACC CCGCCACAGG AAGCACCGCC CACAGCCCGG
AAAGCCAAGG AACCCGCCCA AGTCAGCCTG GAGGAGCATG ACCCTTCGTC GCAGCTTGCT
CCGGCTACGA TGCCCGTGCG CGGCAATCGG CGATTCACCG ACCTGGAAAA CAAATACGTC
TTCGCCGACC GAACAATAGC CGGACAAAAG CCTCGCGCTA GTGCCTCGTC CGGCGAACCG
ATCAACGAGC ACGCGATCGG CGAACCGGGC TCCACAAAGC GCATCCGCGA AACACAGATC
GTCGACGATG ACAGCGAGAT TCCAGACCCG CCGGCATTCC TCGAACACGC TGTCAAAGCG
CTATCCACGC TGAATGATGC TTCCGTGCGA GTCCTGACGG CGAGCCGCGA CGATGGCTGG
ACCGTCCCGA TGCCACTGAT CTCAGACGAG GACGGTGTGC TGAACGAGCA CCTCTTGATG
CCTGAAGACA ATCACCGGCT CAAGCGTGTA GCTGCCTTTG CTGTTTCCTC AAAGGAAGCA
TCCACGTTGC TCATGGTTCA CGAAGCCAAC CCGCCTATAT CGTTTGCGGT TCCCTTGAAA
AACCAGAGCG ATGAAGCGAT ACAACGTGCA GTCCAGGCCG CGACGGGAGC ATTCATCTCA
GTACAGGACG GTGGCGACCA TCGTGTGATG GCGTTGGAAC ACACGCAGGC CAGTACTCCC
GACGAACTGC GCTCCTGGAT CTCAATGCAG CTATACCACG CAGCCATCGC GTATCTGCGG
TGA
 
Protein sequence
MFRINAFPKR EGRWRVDWFG PIAFPDRMVR RRHPSVLVSL SKDKCPEGSS RLSLLSLRET 
ERQQTRCWVS VGTTMLLRIG DVWREQSLES RAADEELHCE NLEISQDTCE LVKAGSSFED
GSFMLPLHEH AGHRENTHSY CVRVTLPDGK LLVVPCMELI RFYFGSSSEL LNRLFHPQLD
RGHLYTGTPA IDRHNRMTLQ LADRIPRASA EDVARIAGSR LAWRAAKMIG ASCVRAAQAR
QEVYPQTLFP FEGTTTLRAA GKWLSRGNDP KGTFLVYQLL SCSHPFPFKS LRFHVTGGKK
AHTTGMVPDT PPQEAPPTAR KAKEPAQVSL EEHDPSSQLA PATMPVRGNR RFTDLENKYV
FADRTIAGQK PRASASSGEP INEHAIGEPG STKRIRETQI VDDDSEIPDP PAFLEHAVKA
LSTLNDASVR VLTASRDDGW TVPMPLISDE DGVLNEHLLM PEDNHRLKRV AAFAVSSKEA
STLLMVHEAN PPISFAVPLK NQSDEAIQRA VQAATGAFIS VQDGGDHRVM ALEHTQASTP
DELRSWISMQ LYHAAIAYLR