Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1679 |
Symbol | |
ID | 6289672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1768066 |
End bp | 1768713 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642625243 |
Product | TnsA endonuclease |
Protein accession | YP_001899249 |
Protein GI | 187928762 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGTGC GCCGGATCCC TAAGAACTAC CTCTTTGTCA CTGGACGTCA TCCCTCCCCG CTGGCGGATG AGGTCATTGA ATTCGAGTCG ATTCTGGAGA AGGAGTACAT GCTCCTGCTG GACTCGGATC CCCAAGTGGA ATCGTACGAA TGTCAGCCGG TCAAAATTGC ACTGTCTCGC GGCCGAGTTT ATGTTCCAGA TCTGCTGGTG ACCTACCGCT GTTCTCCGTC GGGCAATCAG CGGTCTCCAG AATTGGTGGA AATCAAGAAG CGGGAATACC TTGATCGACA CGCCGAGACG TATCGCGAGA AGTTTGCAGC GGCAACTGTC GTCGCCGAAG AGAGAGGCTG GGTCTTCGTT ACCCGAACAG AGATCGACAT CCGGACGCAG CACGTTCAAA ACCTGAAGTT TCTGCATCGG TATCGCCATA CGCCCGCGGA CCCGGTCGCA GTGGAGCGCT TGCTTGCTGC GATGCGCCGG CTGGACAGTC CAACGACCCC CGAGACACTA CTTGGTAGTT TGGCGGACAC CTTAGAGATG CGCGCAGGCC TGATTCCCGT GCTTTGGCAT CTTGTTGCTC ACGGCGAAAT CCAAGCGGAC TTGCAGATTC CGTTGACGGA TAGCACGCAG CTATTTCTAC CGAGCTAG
|
Protein sequence | MPVRRIPKNY LFVTGRHPSP LADEVIEFES ILEKEYMLLL DSDPQVESYE CQPVKIALSR GRVYVPDLLV TYRCSPSGNQ RSPELVEIKK REYLDRHAET YREKFAAATV VAEERGWVFV TRTEIDIRTQ HVQNLKFLHR YRHTPADPVA VERLLAAMRR LDSPTTPETL LGSLADTLEM RAGLIPVLWH LVAHGEIQAD LQIPLTDSTQ LFLPS
|
| |