Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1677 |
Symbol | |
ID | 6286463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1766121 |
End bp | 1767425 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625241 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_001899247 |
Protein GI | 187928760 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.829467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATT TCTACGACAC GCCGTTCGGT ATCGGTCATG ACCACGTGTT CCTGGGCGCA GGGCACGAGA AAAACGAGCG CAAGACATGG GCCGTGATCG TGCTGTGCAC GCTGATGATG GCCGCTGAGA TCATCGGCGG CAGCATGTTT GGCTCGCTGG CCCTGGTGGC CGATGGGCTG CATATGTCGA CGCACGCAGG CGCCATGCTG ATCGCGGCGC TGGCCTACAC ATATGCGCGG CGCCACGCGA ACGACTCACG CTTCGTGTTC GGTACAGGCA AGCTCGGCGA CCTGGCCGGC TTCACCAGCG CCATCATCCT GGCGATGATC GCGCTGCTGA TCGGCTACGA GGCTGTGGTG CGATTCCTCT CGCCGGTGCC GATCCACTTT AGTGAGGCGA TCCCGATTGC GGTGGTCGGC CTGCTGGTGA ACATCGCCAG TGCCTGGCTG CTGAGCGGTG GCGACCACGA TGGCCACAGC CATGGCCACA GTCATCACCA TGGTCATGCC CACGGACACG ATCACGGCCC AGCCGGACTT GGCGACAAAC ATGCACACGG CAAGGAAGTG CAGCACATCA ACGCGCCAGC AGGGGTGTTC GCGCTGTCGA TCTTTGAAGA CGACGTACCG CCAGTTTTCC GCTTGGCTGG AGAAACCATC CCGCTGCCCA GCGACGTGGC GACGGTGACC ACCATCCGGC CGGACGGCAG CCGCCAGGAA TTCCTGATGG TCCGCAAGGC GAACTACCTA GAATCCACCA CAGAGATTCC GGAGCCGCAT GCCTTTACTG CCGTGCTCGG CATCGGCGGC CAGGAATACA GCGTGGCCTT CGAAGAGCAT GAGCACGATC ACGCCGATGG ACACGGGGCG CACCATCGCG ACCACAACAT GCGCGCGGCC TATGTGCACG TCTTGGCCGA CGCCGCCATC TCTGTCCTGG CCATCATCGG GCTGTTGCTG GCCAAAACCT TCGGCTGGCT CTGGATGGAC CCGCTTGCAG GTATCGTCGG TGCGCTGGTC ATCGCCAACT GGGCGTACGG ACTGATGCGC GACACGGGTG GCATCCTGGT CGACATGACA CCAGACAAGC AAATCGGCGG CCGCATCAAG ACTGCACTGG AAACCGATGG CGACGCGCTG CTCGATCTGC ACGTCTGGCG CATCGGCCCT GGGCACCTGG GCGTGGTGGT CTCGGTCGGC ACACGCCAGG CGCATCGCGG GCCGCAGTTT TATCACGAAC GGCTGCGGCG ATTCCAAGCG CTGTCACACG TTACGATCGA GGTTCATTCG TTACCGACCA AATAA
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Protein sequence | MSNFYDTPFG IGHDHVFLGA GHEKNERKTW AVIVLCTLMM AAEIIGGSMF GSLALVADGL HMSTHAGAML IAALAYTYAR RHANDSRFVF GTGKLGDLAG FTSAIILAMI ALLIGYEAVV RFLSPVPIHF SEAIPIAVVG LLVNIASAWL LSGGDHDGHS HGHSHHHGHA HGHDHGPAGL GDKHAHGKEV QHINAPAGVF ALSIFEDDVP PVFRLAGETI PLPSDVATVT TIRPDGSRQE FLMVRKANYL ESTTEIPEPH AFTAVLGIGG QEYSVAFEEH EHDHADGHGA HHRDHNMRAA YVHVLADAAI SVLAIIGLLL AKTFGWLWMD PLAGIVGALV IANWAYGLMR DTGGILVDMT PDKQIGGRIK TALETDGDAL LDLHVWRIGP GHLGVVVSVG TRQAHRGPQF YHERLRRFQA LSHVTIEVHS LPTK
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