| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1672 |
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| Symbol | |
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| ID | 6287490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1758288 |
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| End bp | 1761452 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642625236 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_001899242 |
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| Protein GI | 187928755 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAAAG CGATTCTGAA GCTGTCGCTG CTGCGACGGC CGCTGATCCT GTTGTTCCTG
CTGGCGTTCG TGACGGCAGG GCTGTTCGCG TATTCCAAGC TCAACATCGA GGCGTACCCC
AACCCCGCTC CCGTCATTCT CGAAATCACG GCGCAAACGC CCGGTCTGTC GGCCGAAGAA
ATGGAGCGGT ACTACACCGT GCCGATGGAG ATCGGCCTCG CGGCGACGCC CGGTGTGGAG
AACATCCGCT CCACGTCGTT CTATGGGTTG TCGTTCGTGC GCGTGACCTT TAAGTACGGG
ATCGACTACT ACTTTGCTTA CACGCAGGCG GCACTTGCCC TCCAGCAGAA CGTCAGCCTG
CCCAACAATG TGCAGCCGCA AATTCAGGCG TCCAGCCTGG TCGGGGAAGT GGTGCGCTAT
CAGTTGAAGG GCCCGCCCCA CTTTGGCCTG ACCAACCTGC GCACCTTGCA GGATTGGGTG
TTGCAGCGCC GCCTGAAGAC CGTACCGGGC GTGGCGCAGG TCGTCAGTTG GGGAGGCACG
ACCAAGGAGT ACGACGTCGA GGTCGACCCG AAGAAGCTGG AAGCCTATGG CGTCACCCTG
CCGCAGATGA TGACGGCGCT CGGTAACGCC AATATCAACG TCGGCGGGCG CACGATCAAC
TTTGGCCAGC AGTCAGTCAA CATCCGCGGC GTGGGTCTGA TCCAAGACGT GAAGGACATC
GACAAGATCG TCCTTACGCA GACCAATGGC GTGCCCGTGC AGGTCAAGGA TGTCGCGAAG
ACGAAGATTG GTTTCGCGCC CCGTCTGGGC ATTGCCGGCC GTGACAACGA AAGCGACGTC
GTCACCGCCA TCGTGGTGAT GAACCGCACC ATGCAGACCA ACGACGTGGT GGCGCGCGTC
AAGGCCGAGC TGGACAAGAT CAACACCGAT GGCACGCTGC CGGCAGGCGT GAAGGTCGAG
CGTTACTACG ACCGCTCGGA GCTCGTCTCG GTCACCACGC ACACGGTCAT GCATGCGCTG
CTGTTTGGCT GCCTGCTGGT GTTCTTCATC CAATGGATCT TCCTGGGCGA TTTGCGCAGC
GCCATCATCG TTAGCGCCAA CATTCCGTTT GCGCTGTTCT TCAGCATCCT GATCCTCTTG
CTGACCGGCG AATCCGCCAA CCTGCTATCG GTGGGCGCGG TGGACTTCGG GATCATCGTG
GATTCGTCGG TCATCCTGGT CGAAAACATC TTCCGCAACT TCCAGATGCC GGCGGCGGAG
CAGACGCGCC TGCTGATGAG CCGTGACGCG AAGATGCTGG GCTTCCGCGT GCCGGAGCGC
TTGCGCATGA TTTTCGTCAG TGCGCTGCAG GTCGATCGCG CGGTGTTCTT CTCCGCACTG
ATCACTGTGG CCGCATTTGT TCCACTGTTC ACCATGCAGG GGGTGGAAGG CCAGATCTTC
GGCCCGATGG CGCGTACCTA TGGCTACGCG TTGGCGGGCG CGCTTATCGC CACCTTCACG
GTCACGCCGG CGCTGTGCTC GTACCTGCTG CCCAAGAAGA TCGAAGAGAA GGAAACCTGG
CTCGTTCGCG CGTTGCACAA GGTCTACCAG CCTGCGCTGA CGTGGTCCTT GTCCAACCGG
CGCATTGCCG TGACGATCGG CGCGGTCGTG CTGGCGGTAA CGGCGGCGCT CATGCCGCTG
CTGGGTACGG AGTTCCTGCC GGCGCTTGAA GAAGGCAACC TGTGGATTCG GCTGACGATG
CCGCAAACGG CGTCGCTGGA ATCGGGCGTG GTACCGGTCG CGCGCATGCG CCAGATTTTG
CTCAAGCACC CCGAGGTGCG CACGGTGGTG TCGGCCCACG GTCGCCCCGA CGACGGCAGT
GATGCCGCGG GCTTCTACAA CGCTGAATTC TTCGTGCCCC TCAAGCCGTT CGACCAATGG
TCGGCGGGGA TGACCAAGGA GAAGCTGATC GCGCAGATCC AGAAAGAATT CACCAGTGAG
TTCACCGGGG TCGGCCTGAA CTTCTCGCAG TACATCCAGG ACAACGTGGA AGAAGGGTTG
TCGGGCGTGA AGGGGGCCAA CTCGGTCAAG ATCATCGGCC CGGACCTGCA GGTGCTGGAG
CGGCTTGCCG ATCAGGTACA GGGCGAGATG AGCGAGGTCA AAGGCATCAC AGACCTGGGC
ATCTTCCGCG TGCTCGGTCA ACCGAACCTG AACGTGCGCA TCAACCGTGA GGCGGCCGCG
CGCTATGGGC TCAACACTGG GGATGTGAAC ACCGTGGTGC AAGCGGCCCT GTCGGGCTCT
CAGGCGACCA CCATCCTGGA AGGCGATCGG CAGTTTGCAC TGACGGTGCG GCTGGCCCCG
GAGTACCGTG CCACAATCGA TGCGGTGCGC AACATCCGCG TCGCCTACTC GAACGCGAAT
GGCGGCAACG CCTACATTCC GCTCTCGGCG CTGGCTGACA TCACGCTGGA TACGGGGGCG
TCGTACATCT ATCACGAGAA GAACGCCCGC TATATTCCGG TCAAGTTCAG TGTACGCGGG
CGCGACCTGG GCGGCACGGT GGAAGAAGCG CAGCAGCGCA TCGCCCAGCA CGTCAAGTTG
CCGCAAGGCT ACCGCATCGA GTGGGCGGGT GAGTTTGAAG AACTCGAACA GGCCAAGCAG
CGGCTCGCGG TCATGGTGCC GATCAGCATT CTGTTGATTC TGGTCCTGCT CTATGGACTG
TTCAATTCGC TGCGCGATAG CCTGATGGCG CTGGCCGGTA TTCCGTTTGC GATCACCGGT
GGGGTAGCGG CACTGTTCCT GACGGGGCTG GACTTCAGCG TCTCGGCGGC CATTGGGTTC
GTCTCGTTGT TTGGTGTATC GGTCATGGAC GGCATCCTGA TGATCACCTA CTACAACGAC
TTGCGCCGGG AGCGCGGCCT CCAGCCAACT GAAGCGATGT TCCATGCGGC GCAACAGCGC
ATGCGGCCAA TGCTGATGAC GGCCCTGTCG GCGTGTATCG GCCTGTTCCC GGCGGCGATT
TCCACGGGCA TCGGCAGCCA GGTGCAGCGG CCCCTAGCCA CCGTGGTTGT GGGCGGCATG
TTGGTGGGCC CGTTGATGCT GCTGGTGATC GTGCCTGCGT TGCGGATGGT ATTCCTCGGC
AAGGAGCCGC CTGAAGACTC GCCCCTTGAG GAAGCGCCGG TCTGA
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| Protein sequence | MLKAILKLSL LRRPLILLFL LAFVTAGLFA YSKLNIEAYP NPAPVILEIT AQTPGLSAEE
MERYYTVPME IGLAATPGVE NIRSTSFYGL SFVRVTFKYG IDYYFAYTQA ALALQQNVSL
PNNVQPQIQA SSLVGEVVRY QLKGPPHFGL TNLRTLQDWV LQRRLKTVPG VAQVVSWGGT
TKEYDVEVDP KKLEAYGVTL PQMMTALGNA NINVGGRTIN FGQQSVNIRG VGLIQDVKDI
DKIVLTQTNG VPVQVKDVAK TKIGFAPRLG IAGRDNESDV VTAIVVMNRT MQTNDVVARV
KAELDKINTD GTLPAGVKVE RYYDRSELVS VTTHTVMHAL LFGCLLVFFI QWIFLGDLRS
AIIVSANIPF ALFFSILILL LTGESANLLS VGAVDFGIIV DSSVILVENI FRNFQMPAAE
QTRLLMSRDA KMLGFRVPER LRMIFVSALQ VDRAVFFSAL ITVAAFVPLF TMQGVEGQIF
GPMARTYGYA LAGALIATFT VTPALCSYLL PKKIEEKETW LVRALHKVYQ PALTWSLSNR
RIAVTIGAVV LAVTAALMPL LGTEFLPALE EGNLWIRLTM PQTASLESGV VPVARMRQIL
LKHPEVRTVV SAHGRPDDGS DAAGFYNAEF FVPLKPFDQW SAGMTKEKLI AQIQKEFTSE
FTGVGLNFSQ YIQDNVEEGL SGVKGANSVK IIGPDLQVLE RLADQVQGEM SEVKGITDLG
IFRVLGQPNL NVRINREAAA RYGLNTGDVN TVVQAALSGS QATTILEGDR QFALTVRLAP
EYRATIDAVR NIRVAYSNAN GGNAYIPLSA LADITLDTGA SYIYHEKNAR YIPVKFSVRG
RDLGGTVEEA QQRIAQHVKL PQGYRIEWAG EFEELEQAKQ RLAVMVPISI LLILVLLYGL
FNSLRDSLMA LAGIPFAITG GVAALFLTGL DFSVSAAIGF VSLFGVSVMD GILMITYYND
LRRERGLQPT EAMFHAAQQR MRPMLMTALS ACIGLFPAAI STGIGSQVQR PLATVVVGGM
LVGPLMLLVI VPALRMVFLG KEPPEDSPLE EAPV
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