| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1670 |
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| Symbol | |
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| ID | 6287488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1755400 |
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| End bp | 1756917 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642625234 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001899240 |
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| Protein GI | 187928753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.714759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCA ACACTGCCCA CGGCATGCCA TCGTCCGCCA CTGTTCTTCT GCGCCTGACC
ATCGTGGCGG CGGCATGCCT GTTGACCGCC GCCTGCGCGG TCGGACCGGA TTTCAAGACT
CCGGATGCTC CGAAAGTGAC TGGCTATACG CCCAAGCCGC TGCCGCAGCA GACATCGGCT
GCAGCCACGC AGGGCGGCGA AGCACAGCGC TTTGTCTCGG GGATGCCAGT TTCCGATCAA
TGGTGGAAGG CGTTCCAGTC AGAAAAGCTG AACAAGACGA TTGCCGATGC GATTTCCGCC
AGCCCCACGC TGGCCGCCGC CCAGGCTGCA CTGCGCGTGG CGCAGCAGCA AACGCGCGCG
CAACAAGGAG CGTTCTTCCC AATGCTGCAA GGCTCGTATC AACCGAGCCG ACAGCAAAAC
GCCGTCGGCA CGATTTCGCC CACGCTCACC TCTGGCGCAC CGATCTACAC CCTGCACACC
GCGCAGCTCA CGGTGAGCTA TGCCCCAGAC GTCTTCGGCC TGAACCGCCG GCAGGTGGAA
TCACTGAAGG CCACCGAAGA GGCACAGTAC TTCCAGATGG AGGCGGCTCA CCTCACCCTT
GCGTCCAACA TCGTGGTGGC GGCAGTGCAG GAAGCCTCGC TGCGCGCGCA GATTGAAGCG
CAACAACGCA TTGTCGGCAT CAATACGCAG TTGCTCGACA ACCTGCACAA GCAGTTCGCG
CTGGGCGCGG TAACGGGGCT GGATATTGCA GCTGCCGAAA CGGCGCTTGC GCAGGCCGAG
CAGGCGCTAC CCAACCTGCA AAAGCAACTG GCGGTTCAGC GCGATCTGTT GGCTGCACTG
GCCGGCAAGC TGCCTAGCGA AGGCATCGCC GAGACGTTCA CCTTTGCAGA CTTCACGCTG
CCGCAGGACT TGCCCGTGTC GCTGCCATCG GATCTCGTCC GGCAGCGCCC TGACGTGCGC
GCAGCCGAAG AACAGCTGCA CGCCGCAACA GCGCAGGTGG GCGTGGCGAT CGCCAATATG
CTGCCCCAAC TGACGATCAC CGGCACCAAG GGCGGCACCG CAGAAATCTT CAGCCAGATG
TTCCGGGACG GCAACGTCTT CTGGAGCCTG GTCGGCAATG TGGCGCAGAC CTTCTTCGAT
GGTGGTGCGA TGCTGGCGAA AAAACGGGCA GCCGATGCGG GGGTCGATCA AGCGGAGGCG
CAGTACCGTG GCACCGTCAT CACTGCATTC CAGAACGTCG CCGATACCCT GCACGCGCTA
GATGCCGATG CCGACGTGCT GAAAGCCGCG CTCAGATCCG AACAGGCAGC ACACCGAACT
CTAAACATCA CGGATAGGCA GCGCGCGATC GGCCAGGTCA ACATCCTCGC TGTGCTGAAT
GCAGAACAGG CCTACCAGAC TGCTGTGCAA GCCACGATTG GGGCGCGTGC AAACCGATTC
GCCGATACGG CAGCGCTGTT TCAAGCCCTA GGTGGCGGGT GGTGGAACCG GCCCAACGCT
GACGTCGCAC GGCGCTAA
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| Protein sequence | MPANTAHGMP SSATVLLRLT IVAAACLLTA ACAVGPDFKT PDAPKVTGYT PKPLPQQTSA
AATQGGEAQR FVSGMPVSDQ WWKAFQSEKL NKTIADAISA SPTLAAAQAA LRVAQQQTRA
QQGAFFPMLQ GSYQPSRQQN AVGTISPTLT SGAPIYTLHT AQLTVSYAPD VFGLNRRQVE
SLKATEEAQY FQMEAAHLTL ASNIVVAAVQ EASLRAQIEA QQRIVGINTQ LLDNLHKQFA
LGAVTGLDIA AAETALAQAE QALPNLQKQL AVQRDLLAAL AGKLPSEGIA ETFTFADFTL
PQDLPVSLPS DLVRQRPDVR AAEEQLHAAT AQVGVAIANM LPQLTITGTK GGTAEIFSQM
FRDGNVFWSL VGNVAQTFFD GGAMLAKKRA ADAGVDQAEA QYRGTVITAF QNVADTLHAL
DADADVLKAA LRSEQAAHRT LNITDRQRAI GQVNILAVLN AEQAYQTAVQ ATIGARANRF
ADTAALFQAL GGGWWNRPNA DVARR
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