Gene Rpic_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1645 
Symbol 
ID6288074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1729172 
End bp1729510 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content60% 
IMG OID642625209 
Productconserved hypothetical signal peptide protein 
Protein accessionYP_001899215 
Protein GI187928728 
COG category[S] Function unknown 
COG ID[COG5569] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.191944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACG TTTCCGCTGT TGTATTCGCC CTGACGCTGG CGTCGACTCC AGCCGCCTTT 
GCGGCCACGC CGATGGAAGG TATGGACATG AAGCCTGCTG GTCAAACCAA GCAGGCGCCC
AAGCCCGTGG CAGCAGAGGT CCGCAAGATC TACCTCGACA CCGGCAAGGT CACGCTTAAG
CACGGCGCCA TCGACAATCT CGGCATGGGC GCCATGACGA TGACGTTTGC CGTCAAGGAC
AAGGCATCAC TGCAGCACTT CAAGGAGGGC CAAGCGGTGT GGGCCGTCTT TGATATGGTC
GACGGTCAGC CGACCGTCGT CGATTTGCGG AGCAAGTAA
 
Protein sequence
MNYVSAVVFA LTLASTPAAF AATPMEGMDM KPAGQTKQAP KPVAAEVRKI YLDTGKVTLK 
HGAIDNLGMG AMTMTFAVKD KASLQHFKEG QAVWAVFDMV DGQPTVVDLR SK