Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1641 |
Symbol | |
ID | 6287823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1723524 |
End bp | 1725452 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625205 |
Product | iron permease FTR1 |
Protein accession | YP_001899211 |
Protein GI | 187928724 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
TIGRFAM ID | [TIGR00145] FTR1 family protein |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACTGC AGCGCGTCGT CACCCTCATC CTGTTCTACC TGCTGACATC GGTTTCAAGC GCGTACGCCG ACACGCTGTC CACTCAAGAC AAGACCAAGC AGGTCTGGCA ATTACTCGAC TATCTGGCGG TCGATTACGG TCGCTCCGTC AAGGACGGCC AGGTGGCCAA TGCCGATGAG TACGCCGAAA TGCAGGAGTT TGCGCATGCG GCGCAGCGCC AGATTGCCGA GTTGCCGGCG GGGCCACAGA CGCAAGCCTT GCTCAAGGAT GCTGGCGCGT TGCGCACGCT CATCGCCGAC AAGGCCGCAC CCACCGTCGT CGGTGAACAG GCGCATAAGC TCGCGGACAG CTTGCTGGCC GCCTACCCGG TGCCGATGGC GCCCAGCAAG GTGCCCGACC TGAAGCATGG AGCTACGCTG TATCAAAGCC AGTGCGCGTC CTGCCATGGC AACACCGGAC ACGCCGATGG TCCGCTGGCC GCCAAGCTGA GCCCGCCCCC CATAGCCCTG GCCGATCATC AGCGCGCCCA GGAGCGCAGC GTCTTCGCCC TCCAGCAGAT CATCACGCGC GGTGTCGAGG GCACCTCGAT GCCGAGCTTC GCGCAGCTCA CTGACGATGA TCGCTGGGCA CTGGCCTATT TTGCGTCGAC CTTGTCCTAT TCCGATGCGG ACCGGCAAGC CGGCGCCAAA TTGTGGGCAT CCCGCCCGGA GCTGCATAGC GCGGTGCCGA CGCTCGCCAA GCTCAGCCAG ACGCCAGAAG CGTTGCTGGC CAAGACGATC AGCCCGGATG CCGCGCGGCA ATTGACCGCC TATTTGAGAA GCGCGCCGGA TGTGCTGAAC GCCTCCAACG CAGACAGTCT CGCAATCGCC AAGGACAAGC TCAAAGAGAG CGTAGCCGCC TTCGACCAGG GCGACAAAGC GACTGCCTCG CGCCTGGCGC TCTCCGCCTA CCTCGACGGC TTCGAGCCGG TCGAACCGGC CCTGGCCGCC AAGAACCAGT CGCTGTTCCA GGACATCGAA AAAATGATGG GCCTGTATCG CAACGCGATC ACTACCGGTC AGGCCGAGCA GGTACGGGAC ATCGCGCAGC ATCTGCAGAC GATGCTGACT GAAGCCCAGG ATGCACTGGG TGGCACCAAC GACCCGCTGT CGACGTTCCT GGGCGCCTTG ACGATCCTGC TGCGCGAGGG CCTGGAGGCA CTGCTTGTCG TGGTCGCCAT GATGGCCTTC CTGAAGAAGG CCGAACGCAC CGACGTGCTG CCATACGTCC ATGCCGGCTG GATTGTTGCG CTGGCCGCCG GTGGACTGAC GTGGGCCGTC GCTACCTACC TGGTGGATTT GAGCGGTGCC AGCCGCGAGA TGACCGAAGG CTTCTCGGCA ATCTTTGCGG CCGTGGTCCT GCTCGGCGTG GGCATGTGGA TGCACCAGAA GAGCCTGGCC GGTCGCTGGC AGGCCTATGT GAAGCAGAAG CTGTCCTCCG CGCTGAACAA GCGCTCGGCG ATCATGCTGT TCGTGCTGTC ATTCGTGACG GTGTACCGCG AGGTGTTCGA GACCGTGCTG TTCTACGCCG CGCTGTGGAG CGAAGGGAAC GGCATCTACC TGCTGGCCGG CTTGGGCTCC GGGATTGCGA TCCTGGCGAT CATCGCCGTC GTGCTGCTGC GCTCCTCGGC GCGCCTGCCG ATCCGCCAGT TCTTTGCCTT CAGCTCGGCT CTGGTCGCGG TCCTGGCAGT GGTGCTGATC GGCAAGGGCG TTGCGGCGTT GCAGAAGGTT GGTTTTCTGC ACATCACGCC GATTTCGATG CCGCGTATTG ACGTGCTGGG GATTTACCCG TCCATGCAGA CGGTGATCGC ACAGGTGGCG ATCTTGCTGA TCATTGTGCT CAGCTTCGCG TATAACCTCC GATCGCAGAA GGCATCGAGC AAAGCGTAG
|
Protein sequence | MQLQRVVTLI LFYLLTSVSS AYADTLSTQD KTKQVWQLLD YLAVDYGRSV KDGQVANADE YAEMQEFAHA AQRQIAELPA GPQTQALLKD AGALRTLIAD KAAPTVVGEQ AHKLADSLLA AYPVPMAPSK VPDLKHGATL YQSQCASCHG NTGHADGPLA AKLSPPPIAL ADHQRAQERS VFALQQIITR GVEGTSMPSF AQLTDDDRWA LAYFASTLSY SDADRQAGAK LWASRPELHS AVPTLAKLSQ TPEALLAKTI SPDAARQLTA YLRSAPDVLN ASNADSLAIA KDKLKESVAA FDQGDKATAS RLALSAYLDG FEPVEPALAA KNQSLFQDIE KMMGLYRNAI TTGQAEQVRD IAQHLQTMLT EAQDALGGTN DPLSTFLGAL TILLREGLEA LLVVVAMMAF LKKAERTDVL PYVHAGWIVA LAAGGLTWAV ATYLVDLSGA SREMTEGFSA IFAAVVLLGV GMWMHQKSLA GRWQAYVKQK LSSALNKRSA IMLFVLSFVT VYREVFETVL FYAALWSEGN GIYLLAGLGS GIAILAIIAV VLLRSSARLP IRQFFAFSSA LVAVLAVVLI GKGVAALQKV GFLHITPISM PRIDVLGIYP SMQTVIAQVA ILLIIVLSFA YNLRSQKASS KA
|
| |