Gene Rpic_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1640 
Symbol 
ID6287822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1722537 
End bp1723499 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID642625204 
Productintegrase family protein 
Protein accessionYP_001899210 
Protein GI187928723 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATA TCGACAGGTA TCTGCAGGCA GCGACCCGCG ATCACACACG GCGCAGCTAT 
CAGTCCGCCA TCCGTCATTT CGAGCAAGAG TGGGGTGGCT TCCTGCCGGC CAGCGCCGAC
AGCGTTGCAC GCTATCTGGC TGAGCACGCA CAGACGCTTT CCATCAACAC GCTGCGCCAA
CGGTTGGCTG CGATCGCGCA GTGGCACGTT TCGCAGGGCT TTCCCGACCC CACGCGAGCA
CCGCACGTCC GCAAGGTGCT CAAGGGCATC CAGGCACTGC ACCCCGCGCA GGAGCGGCGC
GCCAAGCCAT TGCAGCTCGC CCAGTTGGAG CAACTGGTTG CCTCGCTGGA TGCGCAGATC
GCGACCGCCT CGTCTGAGGG CAACGCCCAT CAACTCCAGG TGCATACCCG CAACAAGGCG
CTGGTGCTGA TCGGCTTCTG GCGGGGCTTC CGGTCGGACG AACTGAGTCG GCTGCAGATC
GAGCACATCA CGGTGGAGCC CGGCCGGGGC ATGACGATTT TCCTGCCGCG CACCAAGACG
GACCGCAACC ATGTCGGTAC GACCCACAAG GCGCCCGCGT TGTCGCGCTT GTGCCCAGTC
GCCGCCTACG AGGCCTGGTT GGCGGCGTCC GGCCTGACCG AGGGCCCCGC GTTCCGCAGG
ATTGACCGCT GGAGCCGAAT CGCAGCCGAT GGACTGCAGG CCAGCAGCAT CGTGCCTTTG
TTGCGCGCGC TGCTCCATCG CGCAGGACTG CCGCAATCGG ACCGCTACAG CAGCCACTCA
CTACGACGGG GCTTTGCAAC CTGGGCGAAC TCGAACCAGT GGGATCTCAA GATGCTGATG
GAATACGTCG GCTGGAAGGA CGTACGCTCG GCCATGCGCT ATATCGACGC GGCCGACCCA
TTTGCCCAGC ATCGGATCGA AACAGCGCTG TCGGTCGCAC CCCGGCCGGG CATTGCAGTC
TGA
 
Protein sequence
MADIDRYLQA ATRDHTRRSY QSAIRHFEQE WGGFLPASAD SVARYLAEHA QTLSINTLRQ 
RLAAIAQWHV SQGFPDPTRA PHVRKVLKGI QALHPAQERR AKPLQLAQLE QLVASLDAQI
ATASSEGNAH QLQVHTRNKA LVLIGFWRGF RSDELSRLQI EHITVEPGRG MTIFLPRTKT
DRNHVGTTHK APALSRLCPV AAYEAWLAAS GLTEGPAFRR IDRWSRIAAD GLQASSIVPL
LRALLHRAGL PQSDRYSSHS LRRGFATWAN SNQWDLKMLM EYVGWKDVRS AMRYIDAADP
FAQHRIETAL SVAPRPGIAV