Gene Rpic_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1623 
Symbol 
ID6287094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1706530 
End bp1707747 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content64% 
IMG OID642625187 
Producthypothetical protein 
Protein accessionYP_001899193 
Protein GI187928706 
COG category[S] Function unknown 
COG ID[COG3864] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.544735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAC GGATCATCAA GCAGCGTGGT CAACTGGTGC TGAACCACCC TTTCTTCGGG 
GCGCTGGCGC TTCGTCTGAA GCCTGTCGAA GACCCCACGT GCCACACGTT CTGGGTTGAC
GGCCGGGCGC TTGGCTACAA CGCGCAGTTC GTGGCCACCT TGGACGATCT TGAACTGCGT
GGGTGTCTCG CTCATGAGGT GCTGCACCCC GCCAGCGGGC ATTGCTGGCG GCGTGGCAAT
CGCGATCAGA AGCTGTGGAA CGCGGCCTGT GACTATGCGG TCAATCCGGT TGTGCTCGCT
GCCAACTTGA AGCTCCCGAA AGGCGCACTG CTGGAGGAAC GCTTCACTGG CAAGTCAGCA
GAGGAGATTT ATGCGGTGCT CCGCCAGGAA CGGCCACCTG AGGCTCCCCA AGAGCCTCAG
GCCCAGGGCG CTCGCGGTAC GGGCGCTGGG CTGCCATCGC GCGACCCGAA CGCATCCGAT
GCGGCACAAG GGCAGGGCGC TGCCGAAGGT GGCAACGCCG ACGGCAGCCC GACGTATGAG
CCCGGCGACA TCCGCAAGGA TCGCGGCAAT GACCAGGCCT CGACGGAGAC GCAGTGGAAA
GTCGCGGCGA TGAAGGCTGC GCAGGTGGCC AAGATGCGCG GCAAGTTCGG TGCGGATCTG
CAGACCGTGG TTGACCAACT GGTTACGCCG GCGGTCGATT GGCGTGCGGC CCTCGCGCGC
TTTGCAAGCG AGTCGGCCCA AGCCGACTAC AGCTGGTCGA TACCGAACCG CCGCTTCACG
CACCTTGGTC TCTATTTGCC GGCGCTTCAT AGCCGGCGGG TGGGGGACGC CGTGTTTGTG
CGCGATTCGA GTGGCTCGGT GTTCGATGAA ACGCAACGCC AGTTCGCATC CGAGATCCAC
CGCGTTTTCG ATGAAGTGAA GCCATCGCGG CTGATCGTCA TCGACTGTGA CGCGCGTGTC
ACGCAGGTGC AGGTGTTCGA GCCCGGTGAT GCGCTTGAAC TGGCGCCTGT GAAAGGCGGC
GGCGGTACCT GCTTCGCACC GCCGTTCGAG TGGGTGGAGG AACAGGGCTT TCGGCCGGCG
TTTCTCGCCT ATCTGACGGA CATGTATGGC ACGTTCCCCG AAGTGCCGCC GGAGTATCCG
GTGCTGTGGG CCTCAACCAC ACCGTTGCGC AGAATCCATA CCCCGCCATT CGGCGATTGC
ATCGAGGTCA TCGTCTGA
 
Protein sequence
MLERIIKQRG QLVLNHPFFG ALALRLKPVE DPTCHTFWVD GRALGYNAQF VATLDDLELR 
GCLAHEVLHP ASGHCWRRGN RDQKLWNAAC DYAVNPVVLA ANLKLPKGAL LEERFTGKSA
EEIYAVLRQE RPPEAPQEPQ AQGARGTGAG LPSRDPNASD AAQGQGAAEG GNADGSPTYE
PGDIRKDRGN DQASTETQWK VAAMKAAQVA KMRGKFGADL QTVVDQLVTP AVDWRAALAR
FASESAQADY SWSIPNRRFT HLGLYLPALH SRRVGDAVFV RDSSGSVFDE TQRQFASEIH
RVFDEVKPSR LIVIDCDARV TQVQVFEPGD ALELAPVKGG GGTCFAPPFE WVEEQGFRPA
FLAYLTDMYG TFPEVPPEYP VLWASTTPLR RIHTPPFGDC IEVIV