Gene Rpic_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1600 
Symbol 
ID6288729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1690265 
End bp1691143 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content60% 
IMG OID642625164 
Producthypothetical protein 
Protein accessionYP_001899170 
Protein GI187928683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.130582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCAG AGGCGATGTT CGCGTGGCTG CGGCGACGCA CACCGACGTG CAAGCGGCTT 
CTGTTTGGGT TCGCTTTGCT CGACCAGGCG GCAGCACGCG ATCAGGTCGA TCAGTTTGGA
TGGGAGACGG ACCTCTCGGC GCCGTTGTAC TTGGCGATCG AGTTGCCTCA TGAGCAGATC
TTCGAGATTG GCGCACGGAT GCACCCACTG CAGCGCGCCC ACCCCGGGCT CTTGTGCTCT
GTGATGGCGC TGATCAACGA AGCGTCCTGC AACTCGCTCT TCTTGCGCAC ACCGAGTTAC
TTCCTGGAGA TGTTCGCCAG GTGGTGGTGG GATTGGGATG AGGGTGTGTC CGACGAGAAC
GCGAGGGAGA GTCTTGCTGA TCGCCTTGGG GCTGACAGTG AGGACATCGA GCGCTACCTG
CCTTCCAATG TTCGTCCGGT CCTGGCGCCG GAAGAAATGT TCCCCGAGCG CGGCAAGCGC
AAGGGCCGGA AAGGCCCTCG GCGGTCCGTT CTCAAGAGGT CGGAGGTGCT GGAGCTGGCG
CGTTCGTCAA GTCGCTGGAT TCAGCGGGTA TGCCGCGCGA TGCTGCAGCT GGAAGATGCA
CTGCAGCGCG CCAAGGGCTC GAAGCTCTTC GAACATTCGC AATGGGCCGA ACCTGCATAT
TCGGCCGCTT CCATTGCGGT GTTTTCCGAA GAGTGGATCG GCGAACTGCT GGATGACCAT
TTCGAATGCA TTAGCAATAG CGGAGAGGCG ACGATGTACC AGGTGCTGAT TCCGCTGGCG
AGCGACCCGC AACAGGTGCC CAAGCAGTAT GAGGACCTGT CGCGCATGTT CGAGATCGTA
AAGGCTCTCG ACCAATTACT GACCATCATT TCACGATAG
 
Protein sequence
MFAEAMFAWL RRRTPTCKRL LFGFALLDQA AARDQVDQFG WETDLSAPLY LAIELPHEQI 
FEIGARMHPL QRAHPGLLCS VMALINEASC NSLFLRTPSY FLEMFARWWW DWDEGVSDEN
ARESLADRLG ADSEDIERYL PSNVRPVLAP EEMFPERGKR KGRKGPRRSV LKRSEVLELA
RSSSRWIQRV CRAMLQLEDA LQRAKGSKLF EHSQWAEPAY SAASIAVFSE EWIGELLDDH
FECISNSGEA TMYQVLIPLA SDPQQVPKQY EDLSRMFEIV KALDQLLTII SR