Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1596 |
Symbol | |
ID | 6288562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1687485 |
End bp | 1689149 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642625160 |
Product | parB-like partition protein |
Protein accession | YP_001899166 |
Protein GI | 187928679 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.259007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAA ACCAACAGAG CGTCACCGTC AAACTCGGCC AAATCCGGCC GGGCAAGAAC CCCCGGAAGT ACTTCGATCC CGCGAAAATG GCGGAGATCA CGGAGTCCAT CCGTGAGGAT GGCGTAATTC AACCTGTACT GGTGCGCCCT CTTGAGGACG GCACCTACGA ACTGGTCGCT GGCGAGCGCC GGTACCGTGG GGCGAAAGCT GCCTGCGGTG ACGATTACGA CATGCCCGTT GTCATCCGTG AGATGACGGA AGGGGAAGCG CGCCGGCTGG CGCTCATCGA GAACGTTCAG CGCGCCGACA TGGCGCCGTC TGAAGAAGCC GTTGCGGCCG CGGACATCGT TGGGGACCTG AAAGGTGACC GCGATGAAGC TGCCCGCCAA CTCGGCTGGC CGCGATCGAC CCTCGACCGC CGGCTGGCGC TAATGAACTG CAGTCCTGCG GTGCTGGACG CGCTGAACAC GCGTTCCATC CAGCTTGGGC ATGCCGAGCT GCTTGCGACC CTGACGAAGG AAAAGCAGGA CCTGTTCTTG CCGATCATTC TGCAAGAGAA AAAGACGGTG GCGGACCTCA AGAAGGCCAT CGAACAAGCT GCCTGCAACC TGAAGGACGC GATCTTCGAC AAGAGCGAGT GTGCGACATG CGCGCACAAC TCGGAATTGC AGTCGGTGAT GTTTTCCGAG GCGATTTCCT CCGGTAGCTG TACCAACCCG ACCTGCTACA AGGGCAAGAC CGAGACGCAG CTGGAAGGTA TCTCGTACGG CCTGAAGGAC GAATACCCGG TTATCCGTAT CGTCCGCGCT GGCGACAACC ACACGCGCGT GCAATTGCAG GTGGAGGGAC CGACGGGAGT CGGTGCCGAA CAGGCGAAAG CATGTCACGG CTGCCAGAAT TTCGGCGCCG CGGTGAGTGG TCTGCCGGAC AGCCTGGGCA AGGTCTTCCG TGGTCAGTGT TTTGATCCGT CCTGCAATGC CAAGAAGGTT GCAGCGAGGA TCAAGGCCGA GCGCGCTGAA GCGCCGTCTA CTGTTAAGGG CCCCAAAGCC GCGCCGGCCA AGGAGGGCGC GGACAAGGGC GGAAAGGCCG AACACGCGGC CACGTCGATT GCCGAGTCGG ACAAGGTGAA GACCTACCGA CAAGGGGTGT GGCGCAAGGC GCTACGCCGG GAGGTGGCGG CCAACGAAGC AACGGCCAAC CACTATCTCC TCGCACTTTC GCTGTCCGGT CATGCACGCA CCATCACCAG CGACAAGATG GGGACGCTCT TTGAACGGAT CGCGGACGAG ACCAGCTCTC CCACCGATCT CTCGAAGAAC CTTATCTCTG TGGCCGGCCT GGCTACTGAC AAGCGGCTCA ATCTGACGAT CTCGCTCGCG CTTGCCGCGA TCGAAGGAAT CGATGTGCCT GTCTTGACGT CGCTCTGCAA GTACCACGCG CTCGACCTGA CCAAGCACTG GAACCTTCAG AAATCCAAGG ATTTTCTGGA ACTCCTGACC AAATCGGAGT TGAAGGCTCT CGCCGACGAG CTGGGCATGC GCAACGCGCT CGGCGATCGC TTTTCCAAGC TGTTCAACCA ATCGAAGCTC GAAGTCATTG AGGCCCTCCT CAAGGTAGAC GGGTTTGACT ACACGGGCAA GGTGCCCAAG GTCTTGAAGT TCTGA
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Protein sequence | MQENQQSVTV KLGQIRPGKN PRKYFDPAKM AEITESIRED GVIQPVLVRP LEDGTYELVA GERRYRGAKA ACGDDYDMPV VIREMTEGEA RRLALIENVQ RADMAPSEEA VAAADIVGDL KGDRDEAARQ LGWPRSTLDR RLALMNCSPA VLDALNTRSI QLGHAELLAT LTKEKQDLFL PIILQEKKTV ADLKKAIEQA ACNLKDAIFD KSECATCAHN SELQSVMFSE AISSGSCTNP TCYKGKTETQ LEGISYGLKD EYPVIRIVRA GDNHTRVQLQ VEGPTGVGAE QAKACHGCQN FGAAVSGLPD SLGKVFRGQC FDPSCNAKKV AARIKAERAE APSTVKGPKA APAKEGADKG GKAEHAATSI AESDKVKTYR QGVWRKALRR EVAANEATAN HYLLALSLSG HARTITSDKM GTLFERIADE TSSPTDLSKN LISVAGLATD KRLNLTISLA LAAIEGIDVP VLTSLCKYHA LDLTKHWNLQ KSKDFLELLT KSELKALADE LGMRNALGDR FSKLFNQSKL EVIEALLKVD GFDYTGKVPK VLKF
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