| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1580 |
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| Symbol | |
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| ID | 6286964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1669589 |
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| End bp | 1671511 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642625145 |
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| Product | hypothetical protein |
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| Protein accession | YP_001899151 |
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| Protein GI | 187928664 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00525053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCA AGCCGTTAGC AAAGACGCCG ACCCTTCTAT CGATTAAGAA GGGGGGCAGC
TACAGCCACG ATGGGCGTAC ATACGCGATT CTCCACTACG CTGGCTTGGA CAGCGTTATC
GCGCGCGAGG ATGCATCAGG AGCGATGGTT ATCCTCAACG TGGGGTCGCT CAAGGCACCG
TTTAAGGGCC TTGAGGGCTT CCCGGAGCCC AGAGAGCATA TCGACCTTGA AGACGTATCG
GAGGATGACT GGGAAATCGC GCAAAGCCGA CTGGACATCA TTAGTCCTCT GCTCGCTCTC
CGGCGGAACC GGACTAAGGC GGACTATGTC GCTGTGGCAG CCAACGCAGG CGTGAGTGTC
CCGACGCTCT ATAACTGGCT GCGAACCTAC CTTTCGTCCG AGCAGTTGTC CTCGCTGATA
CCGACGCGCA AGAGCGGTGG TCGCGGGCGC AGCCGGCTAG CGCCTGAAGT GAAACTGATC
TTGGACCAGT ACGTTCAAGA GCACTATCTA ACCAAGCAGA AGCCGTCGGC AGCGAAGGCC
GCCAGGGAGG TCCGCCGCTT GTGCCATGTC GCAGCGCTTG AGCCTCTCCC AGCCGTGTCG
ACCATCTACC GACATCTAAG TTGGTTGGAC GAGCAGGAAG CGCTGAAGCG CCGTGAGGGG
CGCCGCGCCG CTGAACAACG ATTTGGTGTG AACAAGGGAT CCATTCCGGA CGCCGAATGG
CCGCTTGCCC TGGTTCAGGT CGATCACACT TTGTTGCCCG TCATCATCGT GGACGAGAAG
CACCGTAAGT CGATCGGCCG GGCCTGGATC ACCTTGGCAA TCGATGTGTT CAGCCGCGCC
TGTTTGGGTA TGTATTTGTC TCTGGATCCA CCTTCAGCGA TGTCTGCGGG TATGTGTATC
TCGCACGCCA TGTTGGACAA GGGCGAATGG ATGGCACGGC TGGGATGTGG CGATATTGAG
TGGCCCTTCC GCGGCCCCAT AGACGTCCTG CATATGGACA ATGCCAAGGA GTTCAGAGGC
AAGATGCTGG CCGTTGCTAC GCGGGAGTAC CACATCGACA TTCATCTCCG GCCGGTCAAG
CAGCCTCGCT ATGGTGCGCA TATCGAGCGG CTCATGGGTA CCGTATCCGA GGAGTTGAAA
GAACTCAAAG GGGCAACCTT CGCAAATCCC CAGCAGAAAG GAGAGTACGA CGCCGAGGGC
AATGCCTGCA TGACCATCGA CGAACTGGAG AAATGGCTTG TCCTAATGTT CGCTCGATAT
CATCGAGACG TTCACGCCGG CATTGGCACG ACGCCATTGA CCAAATGGAC TGAGGGCATT
CTCGGCACAC GGGGAAAGAT GGGGCGTGGA ATCCCACCAA TAGTCACCGA CCCCGAGAAG
CTCCGCATCG ACTTCATGCC ATATGTGGAG CGAACGATCC AAGGCGATGG CGTCGTCAAC
GAAAGAGTTC ACTACTTCCA TGACGTGTTG CGGCCATGGA TCGGCGAGCG TGATCCTGAT
AATCCGAGGA AGGGCAAGCA GTTCCGGTTT CGCTATGACC CGCGCGACAT GAGCGTGCTG
TACTTCTTCG ATTCGGATCT CAAACGTTAC CAGGCGATTC CCTATCGAGA TTCGAGCTTG
CCGCCTGCAA GTTTTTGGGA GATTCGCGCG GCCAACAAAG CGGCGAAGGA CGCCGGCATG
AAGGACTACA GCGAGCGAGA TCTTTTTGCG CTGATCACTC GGCAGCGTGA ACTCGAAGAG
GCTGCCGCTG CACGGAGCAA GGCGGCGCGT CGAGCAGAGC AGCAACGCAA GCAGCAAGAG
AAGGCACGCG CGCGGAAGCC TCAAGATTTG CCGCGTGCTT CGAAGGTGGA TCCCTCCAGA
CTAGCGCCAA GCATCCGGGG ATACGACCCT GACGATGTCC AACCGCTGAG CGATGATGAA
TAG
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| Protein sequence | MASKPLAKTP TLLSIKKGGS YSHDGRTYAI LHYAGLDSVI AREDASGAMV ILNVGSLKAP
FKGLEGFPEP REHIDLEDVS EDDWEIAQSR LDIISPLLAL RRNRTKADYV AVAANAGVSV
PTLYNWLRTY LSSEQLSSLI PTRKSGGRGR SRLAPEVKLI LDQYVQEHYL TKQKPSAAKA
AREVRRLCHV AALEPLPAVS TIYRHLSWLD EQEALKRREG RRAAEQRFGV NKGSIPDAEW
PLALVQVDHT LLPVIIVDEK HRKSIGRAWI TLAIDVFSRA CLGMYLSLDP PSAMSAGMCI
SHAMLDKGEW MARLGCGDIE WPFRGPIDVL HMDNAKEFRG KMLAVATREY HIDIHLRPVK
QPRYGAHIER LMGTVSEELK ELKGATFANP QQKGEYDAEG NACMTIDELE KWLVLMFARY
HRDVHAGIGT TPLTKWTEGI LGTRGKMGRG IPPIVTDPEK LRIDFMPYVE RTIQGDGVVN
ERVHYFHDVL RPWIGERDPD NPRKGKQFRF RYDPRDMSVL YFFDSDLKRY QAIPYRDSSL
PPASFWEIRA ANKAAKDAGM KDYSERDLFA LITRQRELEE AAAARSKAAR RAEQQRKQQE
KARARKPQDL PRASKVDPSR LAPSIRGYDP DDVQPLSDDE
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