Gene Rpic_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1557 
Symbol 
ID6287566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1646510 
End bp1647697 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID642625122 
Producttranscriptional regulator, Fis family 
Protein accessionYP_001899128 
Protein GI187928641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACGC GCATCAATCT CAAGCCGATC CTGGCGAACT ACTCGCTGCC GGAACGGTTC 
AAGTCGGAAT TCGCGGTCTT GGCGGGCGAG AACCTGCACA AGCCGCACAG CCAGACCCGC
GTCAGCGGTC GCGCGCTGTC GTCGATCTCG CAGAAACAGC GCGCGCAGAT GTTGCTCAGT
CTCGCAGTGG AGCTGCGTGA GGGCGGCTTC ACCATCATGT CGCCCTACAA CCTGGCGGAG
AAGCACCTGC GATGGTTGGT GCAGCGTTGG GTGACAGAAC GAAACCTCGC GGTGGGCAGC
GTTGAACTGC GCCTCTCACA CCTGCGCGCG CTGTGCTCGT GGATGGGCAA GACCAACATG
GTGGGCGGCA TCGATGACTA CGTGGAGAGG CCGGCAGGCT ACACGCGCAG CTACGCCGCC
GAGACCGACC GTTCTTGGGA CGGCAACAAC ATCGACGCGC TAGCCAAGAT CGAGGAGATC
GCCCAGACGG ATGCCCACGT CGCAATTCAA CTGAAGCTTG AGGCAGCGTT CGGGTTGCGC
GCGAAGGAAA GCTGGCGACT GCGCCCAGCG CGCGACCTAC TTCCATCGGG CTATCTGCAC
GTGCAGGACG GCACCAAGGG AGGCCGGCCG CGACAGGTGC TGATCGAGTT CGATTGGCAG
TACGACCTGC TTGCGGAGGC GGCTGAGTTG GCCGCGTGCA CGAATCCCGA ACGGGGCTCC
CTGATCCCGG CGACCTATAC GCAGGTGCAG TGGCGCAGGC GCTTCTATAC CGTGCTGGAA
AAGCACGCCG TGACCAAGCG CGGCGACGGT GTCACCGCCC ACGGTCTACG ACACCAGTTC
CTGCAGCAGA TGTACCAACG GCTGACCGGT GAGCAAGCGG CCATCAAGGG GGGCGCACGC
GTTCTCGACC GTGAAGCGCA CAAGGACGCC ATGACGCGGG TGGTGGAAGC CGCCGGCCAC
AGCCGCAAGG AGAAGGCCAA CGCCTACCTG TCGACGCATT CCGCGATCGC AGCCCGGAGC
CGGCCCGTCG TCACACGTGA GATGGCCGTC GCGGCGGTTG CCGCGGCCAA TGGGGTCAAG
CTGAAGGCGG CAGAGGCCCT GGGCATTTCG CGCCCCGCAC TGTATCGCCT GCTTGCCAAG
CCCGCCGAGG CGGGTACTGC GGCCGGCCAT CGGCACTTCA CGGGATGA
 
Protein sequence
MQTRINLKPI LANYSLPERF KSEFAVLAGE NLHKPHSQTR VSGRALSSIS QKQRAQMLLS 
LAVELREGGF TIMSPYNLAE KHLRWLVQRW VTERNLAVGS VELRLSHLRA LCSWMGKTNM
VGGIDDYVER PAGYTRSYAA ETDRSWDGNN IDALAKIEEI AQTDAHVAIQ LKLEAAFGLR
AKESWRLRPA RDLLPSGYLH VQDGTKGGRP RQVLIEFDWQ YDLLAEAAEL AACTNPERGS
LIPATYTQVQ WRRRFYTVLE KHAVTKRGDG VTAHGLRHQF LQQMYQRLTG EQAAIKGGAR
VLDREAHKDA MTRVVEAAGH SRKEKANAYL STHSAIAARS RPVVTREMAV AAVAAANGVK
LKAAEALGIS RPALYRLLAK PAEAGTAAGH RHFTG