Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1527 |
Symbol | |
ID | 6289724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1619830 |
End bp | 1620711 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642625092 |
Product | Conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_001899098 |
Protein GI | 187928611 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGT CCCTATTGCG CACAACTTCC TCGGCGCTCG CATGCGCTTG TCTCGCGCTG GCTGTTGTCG GAGGCGCGTG GGCTGCTGCC GAGCGCCCCG CGAAGCGCGC CGAACCTGTT ATCCCCCCGC TGAACTTGGG ATCAATGGCG GATGCCATGA ACCCCATGAA TCCGTTCAAC GGTGGAGCGG AACCGCTGGC TATGCCGGGC GATTCCCGCC TCGTCGTCTT TACGTACAGC AAGGATCAGA TTTATCGCGT CCTGACCGCG CCACTGAAGG GAACCACCAT TGAGTTCCCG GACGATGAGC AGATCGTGTC GGAGCCGGCG TGGGGTGACA GCGTGCGCTG GGAATCGTCA ACGGACAACG GCAATCATCT CTATCTCAAG CCGCACGCTG CCGGTCTGGT CAACACCCTG TCGGTGACCA CAAACAAGCG CTCCTACGAG TTCACGCTGG TGTCGTCCCC CCTGGGCGGG ATCTTCTACC AGAAGGTTCG CTTCCGCATC CCTGAGACCG TGATGGCCAA GATCAAGGCG CGGGCAGATG GCGAGGCACG CGAGCAGGGA GAGCGTCCGG CGAACACCGT CGGCGTTTCG CCGGACAAGC TCAACTTCGA CTATTCGACG TCGGGAAGCG CGGACTTCAA GCCCGACGCT GTCTTTGATG ACGGCAAGCT CATCTGGATG CGCATGCCCG CGACTGCCAG CGAGTGGCCC GTCGCGCTGG TGAAGGACGG AAGTGATTTC GTCGTAGCGA ACTTCATTCG CCGAGGCGAC TACCTCGTGC TGCAGCGCCT GGCAGAGACC GTGGCGCTTC GGTCGGGTAG CACGGAGGTG ATCGTGCGCC GCGGCCGCGG TCGCTTCTTG GGTCTCTTCT AA
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Protein sequence | MTMSLLRTTS SALACACLAL AVVGGAWAAA ERPAKRAEPV IPPLNLGSMA DAMNPMNPFN GGAEPLAMPG DSRLVVFTYS KDQIYRVLTA PLKGTTIEFP DDEQIVSEPA WGDSVRWESS TDNGNHLYLK PHAAGLVNTL SVTTNKRSYE FTLVSSPLGG IFYQKVRFRI PETVMAKIKA RADGEAREQG ERPANTVGVS PDKLNFDYST SGSADFKPDA VFDDGKLIWM RMPATASEWP VALVKDGSDF VVANFIRRGD YLVLQRLAET VALRSGSTEV IVRRGRGRFL GLF
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