Gene Rpic_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1523 
Symbol 
ID6289224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1616960 
End bp1617289 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content62% 
IMG OID642625088 
Producthypothetical protein 
Protein accessionYP_001899094 
Protein GI187928607 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5268] Type IV secretory pathway, TrbD component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGC ACAAGGTTAG TCGCTCGCTG TCACTGCCTC GCATGATCGG TGGTGTCGTG 
CGTGGCTTCG CCATTGCCAA CGGCACGCTC ACCGCAGTGC TGGTCTACAT CACCTACCGG
GCGGGTTGGC AGTTTATCTG TGGATTCCTC GCGCTCGGCA TGGTGGTTCA CATGGCGCTG
CGTTGGCTGA CCAACAAGGA CCCGTGGTGG AACCAAATCC TGATGGTCTA TGACCGCTAT
GGCGACTTGT ACGAGCCAGG CCCCTGGCAC GGCAAGCTCG GCGCGCGCTT TCGCCGGCCC
TACGGGTTCG ACAGTGATCT GCCATGCTGA
 
Protein sequence
MRQHKVSRSL SLPRMIGGVV RGFAIANGTL TAVLVYITYR AGWQFICGFL ALGMVVHMAL 
RWLTNKDPWW NQILMVYDRY GDLYEPGPWH GKLGARFRRP YGFDSDLPC