Gene Rpic_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1509 
Symbol 
ID6286953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1600944 
End bp1602020 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content57% 
IMG OID642625074 
ProductparB-like partition protein 
Protein accessionYP_001899080 
Protein GI187928593 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.240811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.318219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGA ATACTAAGGA CACTAAAGTG CAAGGCGCCT CGACAACAAA GGGGCAGCCC 
ATCCCAAAGC TCACCCTCGC GAGCGGGCTG ATTAAGGGGT TCAAGAACGA GCAGCAGGCC
ATTCAGACTC GCGAGCGAGA GCAGGAACCG CCTCCGGCTT CCCCTCAGGA GCAAGAATCT
CAACCCGTTA CCGAGACAAC CGCCAACACG GTGGAACCTG CTGCCGGCCC AACTGCGTCC
GCAGTTGGTG GGCGCAAGAG CATCGCAATT GCCGATTGCG TCTCGAACCC GTACAACCCT
CGCGTCTTCT ATCCAGAGGC GAAAATCCAA GAGTTGGCCC TAACCCTTCA AAGGGAAGGC
CAAATTGAGG CCATCAAGTT CACGCGCCTA CCTCAGTTCC CTGGCAAGTA TGTGATCATC
GACGGCGAGC GTCGGCTGCG TGCGAAGAGA TCGCTGGGCG AGACGCACAT CGATGCCGAA
GAACGTCATG ACGTACTGCC CATCGACCTC TACACCACGG CTTACCGAGC GAACAACGAC
CACGAGCGGC AGTCAATCTT CGATGACGCG ATTGCGTGGC AGCAATTGAT CGAGCAACAG
GTGGTCGCGG ATCAAAATTC GCTGGCTGAG AAGGTCACCA AAGACAAGGC ATACGTCAGC
AAGGTTCTTT CGCTGAACGC ACTGCCGAGA GCCATTCTAG AGCGCATGGC AGAAAGTGCT
GATCGTGTGG GGTTGCAGGC GGCCTACTGC CTCAAGTTGA TCTTCGACCG TGTCGGGGAG
GAAGGCGCTG ATCGTCATCT GACGGCAGTT ATCGAAGGCA AGAGAACGGT GCGCGAATTG
GAGCTCATCT TGCGCAACCT GCAAGGCCCG GGCGCTACCG CGAAGCGAAG TCGCACTCGC
TACCACCAGC TTTTCGATTT CAAAGCTGAT GGTGTGCAGC GCGGCCAACT TAAGACATTT
CCTGACGGCC GAATTAGCTT GGAGCTGAAG GAAATTCCGG CTGATAAACA AGAGGCGCTG
GCTGAGAAGC TGAAGGCACT GGTTGACCAA GAGTTGGTAG AGCCATCAGC GGGCTAG
 
Protein sequence
MSKNTKDTKV QGASTTKGQP IPKLTLASGL IKGFKNEQQA IQTREREQEP PPASPQEQES 
QPVTETTANT VEPAAGPTAS AVGGRKSIAI ADCVSNPYNP RVFYPEAKIQ ELALTLQREG
QIEAIKFTRL PQFPGKYVII DGERRLRAKR SLGETHIDAE ERHDVLPIDL YTTAYRANND
HERQSIFDDA IAWQQLIEQQ VVADQNSLAE KVTKDKAYVS KVLSLNALPR AILERMAESA
DRVGLQAAYC LKLIFDRVGE EGADRHLTAV IEGKRTVREL ELILRNLQGP GATAKRSRTR
YHQLFDFKAD GVQRGQLKTF PDGRISLELK EIPADKQEAL AEKLKALVDQ ELVEPSAG