Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1497 |
Symbol | |
ID | 6286656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1587723 |
End bp | 1588568 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642625062 |
Product | mucin-associated surface protein |
Protein accession | YP_001899068 |
Protein GI | 187928581 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000680781 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGTTCTACG CCGAGCAAAT CAAGCCGACG CTAAGCGCAG TGCGCGAGCG GCTGGGCACT GGCAGCATGA ACACCATCCA CCGCCATCTG GTTACTTGGC AGGGTCAACA AAAGCCTGCC GCGCGCAAGA TTGGCGATCC GAACCCCCGC CTGCTGGCCG CACTGGGCAC CGAGTTTTCG CGGGTGGCCG AGGACGCCGC GGCCGACGCC GAGGCCGCAC TGGCGCAGGT CATGAGTGAA AACGCGGTGC TGGCCAGCAC TGGCGAGGCT CTGGAAGCTG AACGCGACGC CCTGACGCAG GAGCTGCAGC AGGTTGCGAC AGAGCGCGAC AAGCTTGCCG GCAAGGCGGC CGAGCAGGCA GCAGAGATCG AACGCTTGAA TGCAGAGTCG GAGCGGGAGC GCGGCGAACT CGCCGCCGTT CGTCGGGCGC TCGCGCAAGT GGAGTTGCGC CTGGAAGCGC TGCCACACTT GGAGCGCGAA CTGAGCGAAC TGCGCGCCCA ACTGGCGGCG GAACAGGCCG CCCGGGTCGC TGCCGATCGC ACAGCCGCCG TCGCCGATGC GCAGCGTGAA GCTGCTGACA TCGCCCGAAT CCAGGCCAAC GAGCGCTTGG CCAACGCCGA ATCGCGCGAG CACCAGGTGC GTGCCCAACT GGCTGAAGCG CAGGCCGCGC ATGAGCGCAC CCGCGAGAAA CTAACCGAGG TCGTCGGTCT TGAGGCCGGT GCCCAGGCCG AGTTGCGAAT GCTGCGCGAG CAAATTGAGG CCGCGAAGCC GACACCAGAG TCGGCACCAG ATCAGCAGAC CGGTCAACCG CCGAGCAAAC CAAACTCACG GCGCAAGGGG GCGTAG
|
Protein sequence | MFYAEQIKPT LSAVRERLGT GSMNTIHRHL VTWQGQQKPA ARKIGDPNPR LLAALGTEFS RVAEDAAADA EAALAQVMSE NAVLASTGEA LEAERDALTQ ELQQVATERD KLAGKAAEQA AEIERLNAES ERERGELAAV RRALAQVELR LEALPHLERE LSELRAQLAA EQAARVAADR TAAVADAQRE AADIARIQAN ERLANAESRE HQVRAQLAEA QAAHERTREK LTEVVGLEAG AQAELRMLRE QIEAAKPTPE SAPDQQTGQP PSKPNSRRKG A
|
| |