| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1496 |
|---|
| Symbol | |
|---|
| ID | 6286655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1586681 |
|---|
| End bp | 1587319 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642625061 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001899067 |
|---|
| Protein GI | 187928580 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.287933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.000264737 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAAA GTCAGTCCTT CGATAGCCCG ATCCCGATCC CGCGACCTCG CGGAGCGCAT
CGGCTCGAGG CCTTCAGCCT CAAATTGGGG CGCCGGGTGT CGTTCTATCG GTGTGCGGCT
CTCGATCAAT GGCTGAGGCT GGAGGCCGAT CCCGACGTTC AGCGTTTTTG CGAAAGGCCT
GGGTTCATCC TAGTGGGCGG ACAGCGACAC TTGGCCGAGT TCTGGGTCCG TTATGAAACT
CGGGACGAGT TGGTGTTGCT CTCAGAGTCA GACGACGAGG GCATGGTCGT CGACAAAGGG
CGCCAACTGG ACGACTCAGA GATCGATATT CGTGTGGTGC CGCCGGCAGA ACTCGCTGCA
TCCCGAGTCT GGATCGACAA CTGGCAACGG ATGTTACCCA CGATCGTGGC CAATCGCGGC
TTGCCAGCGG CGAGTCTGCT GACAGCGATC CGGCGCTTTG CGACAGCTGA GCCGAGGCAA
CTCCTGACCA TTGAGCGCGA GTACGCCACA GGCGATCCCG TTCTGGTTCG CACCGCGGTG
TATGAGTTAT TGCGCACGGG CAAGCTCTCG GCACCGACCT TGCATACGGA AGCGTTGTCG
CTGCTCACAC TGTTCTCGGC ACCGGGAGGA CAGTCCTGA
|
|---|
| Protein sequence | MGKSQSFDSP IPIPRPRGAH RLEAFSLKLG RRVSFYRCAA LDQWLRLEAD PDVQRFCERP
GFILVGGQRH LAEFWVRYET RDELVLLSES DDEGMVVDKG RQLDDSEIDI RVVPPAELAA
SRVWIDNWQR MLPTIVANRG LPAASLLTAI RRFATAEPRQ LLTIEREYAT GDPVLVRTAV
YELLRTGKLS APTLHTEALS LLTLFSAPGG QS
|
|---|
| |