Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1463 |
Symbol | |
ID | 6286832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1554639 |
End bp | 1555433 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642625030 |
Product | ABC transporter related |
Protein accession | YP_001899036 |
Protein GI | 187928549 |
COG category | [R] General function prediction only |
COG ID | [COG1101] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.466344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000000593097 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGAGCG CACAAGGACT CACCCTCACC TTCAACCCGG GCACGCCGAT TGAGACGCGC GCGCTGCGCG GCCTGTCGCT GGAGATCCCG TCGGGCCAGT TCGTGTCCGT GATCGGCTCG AACGGGGCCG GCAAATCGAC GTTCCTGAAC TCCATCAGCG GCGACCAGCT GGTCGACTCG GGCCGCATCA CCATCGACGG TGAAGACGTC ACGCGCAAGA CCGCGTGGCA ACGCGCCGAC AAGGTCGCCC GCGTGTTCCA GGACCCGATG GCCGGCACCT GCGAAAACCT GACCATCGAA GAGAACATGT CGCTGGCCAT GTGCCGCGGG CAGCGTCGCG GTTTCAAGTT CGCGACCAAC CGCAAGTGGC GCGAGATCTT CCGCGAGCAA CTGCGCCGGC TCGACCTAGG CCTGGAAAAC CGCCTGACCG ATCGCATCGG CCTGCTCTCC GGCGGGCAGC GCCAGGCCGT GAGCCTGCTG ATGGCCTCGC TGCAGTCGTC GCGCATCCTG CTGCTGGATG AGCACACCGC CGCGCTCGAC CCGAAAACGG CCGCCTTCGT GCTGGAGCTG ACCGCCAAGA TCGTCTCGGA GAGCAAGCTG ACGACGATGA TGGTGACGCA CTCCATGCGC CAGGCGCTCG ACTACGGCGA CCGCACGGTG ATGCTGCACC AGGGCAACGT GATCCTCGAC GTGCAAGGCG AGGAACGCCG TGGCCTGGAC GTGCCGCACC TGCTGCAGAA GTTCGAGGAA ACGCGCGGTG CCAAGGTGGA CGACGACGCG CTGTTGCTGG GCTGA
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Protein sequence | MLSAQGLTLT FNPGTPIETR ALRGLSLEIP SGQFVSVIGS NGAGKSTFLN SISGDQLVDS GRITIDGEDV TRKTAWQRAD KVARVFQDPM AGTCENLTIE ENMSLAMCRG QRRGFKFATN RKWREIFREQ LRRLDLGLEN RLTDRIGLLS GGQRQAVSLL MASLQSSRIL LLDEHTAALD PKTAAFVLEL TAKIVSESKL TTMMVTHSMR QALDYGDRTV MLHQGNVILD VQGEERRGLD VPHLLQKFEE TRGAKVDDDA LLLG
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