Gene Rpic_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1463 
Symbol 
ID6286832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1554639 
End bp1555433 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID642625030 
ProductABC transporter related 
Protein accessionYP_001899036 
Protein GI187928549 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.466344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000593097 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAGCG CACAAGGACT CACCCTCACC TTCAACCCGG GCACGCCGAT TGAGACGCGC 
GCGCTGCGCG GCCTGTCGCT GGAGATCCCG TCGGGCCAGT TCGTGTCCGT GATCGGCTCG
AACGGGGCCG GCAAATCGAC GTTCCTGAAC TCCATCAGCG GCGACCAGCT GGTCGACTCG
GGCCGCATCA CCATCGACGG TGAAGACGTC ACGCGCAAGA CCGCGTGGCA ACGCGCCGAC
AAGGTCGCCC GCGTGTTCCA GGACCCGATG GCCGGCACCT GCGAAAACCT GACCATCGAA
GAGAACATGT CGCTGGCCAT GTGCCGCGGG CAGCGTCGCG GTTTCAAGTT CGCGACCAAC
CGCAAGTGGC GCGAGATCTT CCGCGAGCAA CTGCGCCGGC TCGACCTAGG CCTGGAAAAC
CGCCTGACCG ATCGCATCGG CCTGCTCTCC GGCGGGCAGC GCCAGGCCGT GAGCCTGCTG
ATGGCCTCGC TGCAGTCGTC GCGCATCCTG CTGCTGGATG AGCACACCGC CGCGCTCGAC
CCGAAAACGG CCGCCTTCGT GCTGGAGCTG ACCGCCAAGA TCGTCTCGGA GAGCAAGCTG
ACGACGATGA TGGTGACGCA CTCCATGCGC CAGGCGCTCG ACTACGGCGA CCGCACGGTG
ATGCTGCACC AGGGCAACGT GATCCTCGAC GTGCAAGGCG AGGAACGCCG TGGCCTGGAC
GTGCCGCACC TGCTGCAGAA GTTCGAGGAA ACGCGCGGTG CCAAGGTGGA CGACGACGCG
CTGTTGCTGG GCTGA
 
Protein sequence
MLSAQGLTLT FNPGTPIETR ALRGLSLEIP SGQFVSVIGS NGAGKSTFLN SISGDQLVDS 
GRITIDGEDV TRKTAWQRAD KVARVFQDPM AGTCENLTIE ENMSLAMCRG QRRGFKFATN
RKWREIFREQ LRRLDLGLEN RLTDRIGLLS GGQRQAVSLL MASLQSSRIL LLDEHTAALD
PKTAAFVLEL TAKIVSESKL TTMMVTHSMR QALDYGDRTV MLHQGNVILD VQGEERRGLD
VPHLLQKFEE TRGAKVDDDA LLLG