Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1454 |
Symbol | |
ID | 6286697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1544966 |
End bp | 1546222 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642625021 |
Product | putative Leu/Ile/Val-binding precursor signal peptide protein |
Protein accession | YP_001899027 |
Protein GI | 187928540 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.689269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00017453 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGAAGT TCCGTCCGTT GGTTGTGGCT GTTGCATGTG TTGCGGCAAT CGGTGGGGCA GCTCTGCCCA CTGCAGCGTC CGCCGCCGAA ACCGTGAAGA TCGCCTGGAT CGATCCGTTG TCCGGCCTGA TGGGCGCGCT GGGTCAGAAC CAGTTGCGCA GCTGGCAGTA CATTGCCGAT CTCGCCACGC AGAAGAACTG GGCCGGCGAC GGCACGAAGT TCGAAGTGGT GGGCTTCGAC AACAAGCTCT CGCCGCAGGA AAGCCTGACG GCGCTCAAGC AGGTGGCTGA TCAGGGCATC CACTACATCG TGCAGGGCAA CGGCTCGAGC GTGGGCATGG CGCTGGAAGA CGCCGTGGCC AAGTACAACG AGCGTAATCC GGGTAAGGAA ATCGTCTACC TGAACTACGC TGCGGTGGAT CCGGACATGA CGAACAGCAA GTGCAATTAC TGGCACTTCC GCCTGGACGC CAACTCCGAC ATGAAGATGG AAGCGCTGAC CAGCTTCCTG GCGAAAGATC CGAAGGTCAA GAAGGTCTAC CTGATCAACC AGAACTATTC GTTCGGCCAT CAGGTCGCGC GTGCGGCCAA GGAATACCTC AAGCGCAAGC GTCCAGACAT CGAGATCGTG GGTGAAGACC TGCACCCGCT GGCGCAGGTG AAGGACTTCT CGCCGTACGT CTCGAAGATC AAGTCGTCGG GTGCCGACAC CGTCATCACC GGCAACTGGG GCAGCGACCT GGCACTGCTC ATCAAAGCCG GCAAGGATGC AGGCCTGAAC GCGAACTTCT ATACGTACTA CGCCTCGACC ACGGGCGTTC CGACAGCGAT GGGCTCCGCA GGGGCAGATC ATGTGAAATA CGTGGGCTAC TGGAACGTCA ACAACGACGG CTACAAGGGC GCCGATATCG TCGAGGGCTA CAAGAAGAAG TACAACGACG ATTACTACCT CATGGCGTCG TACACCGGCA TCGCCATGCT GGCCAAGGCC ATCAAGCAGA CGAAGTCGGC CGAGCCTGCC AAGGTGGCCA AGGCCTTCGA AGGCATGAAG GTCGACAGCC TGAACGGCAC TTTCGAGATG CGCGCGTCTG ACCACCAGGG CCAGCAGCCG CTCTACATCG CCACCTGGGA AAAAACCAAC GGCAAGAACG TCAAGTTCGA CCAGGAAAAC ACCGGCTACG GCTGGAAGAC CGATGCGGTG CTCGACCAGT ACGTCGCGTC GCAGCCGACT TCCTGCCAGA TGAAGCGTCC ACAGTAA
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Protein sequence | MTKFRPLVVA VACVAAIGGA ALPTAASAAE TVKIAWIDPL SGLMGALGQN QLRSWQYIAD LATQKNWAGD GTKFEVVGFD NKLSPQESLT ALKQVADQGI HYIVQGNGSS VGMALEDAVA KYNERNPGKE IVYLNYAAVD PDMTNSKCNY WHFRLDANSD MKMEALTSFL AKDPKVKKVY LINQNYSFGH QVARAAKEYL KRKRPDIEIV GEDLHPLAQV KDFSPYVSKI KSSGADTVIT GNWGSDLALL IKAGKDAGLN ANFYTYYAST TGVPTAMGSA GADHVKYVGY WNVNNDGYKG ADIVEGYKKK YNDDYYLMAS YTGIAMLAKA IKQTKSAEPA KVAKAFEGMK VDSLNGTFEM RASDHQGQQP LYIATWEKTN GKNVKFDQEN TGYGWKTDAV LDQYVASQPT SCQMKRPQ
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