Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1453 |
Symbol | |
ID | 6286616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1543892 |
End bp | 1544884 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642625020 |
Product | inner-membrane translocator |
Protein accession | YP_001899026 |
Protein GI | 187928539 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0626411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000392486 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCTCGC CCGTGCTCCG CCGAATCTGC TGGAAGGGCT GCAGCGTGGA ATTTCTAGTC ATCAATCTCT TGAACGGCAT CAGCTACGGG CTGCTGCTGT TCATGTTGTC TTCGGGCCTG ACGCTGATCT TCAGCATGAT GGGCGTGCTC AATTTTGCAC ACGCCAGCTT CTACATGCTG GGCGCGTATT TCGCCTATGT CGTCAGCGGC TATCTGGGCT TCTGGACCGC GTTGATCGTG GCGCCGCTGC TGGTGGGCGC GCTGGGCGCA GTTGTCGAGC GCTTCGGCCT GCGCACGGTG CACCGCTATG GCCACGTGGC CGAACTGCTG TTTACCTTCG GACTGGCCTA TCTGATTGAA GAAGGCGTGA AGCTGGTGTG GGGCCTGCCC GCCGTGCCGT ACCGCGTGCC GGACGCGCTG GATGGCCCGT TGTTCACGCT GTTCACGTCG TCGTTTCCCA AGTACCGCGC CTTCATGATG CTGGTGTCGC TGCTGATGCT GGTTGGCATT TTTCTGCTGC TCACGCGCAC GCGTATCGGG CTCGTCATTC AAGCTGCGCT TACGCATCCG GACATGGTCG AAGCGCTGGG TCACAACGTA CCGCGCGTGT TCATGCTGGT GTTCGGCGGC GGCTGCGCGC TGGCCGGGTT GGCGGGCGTG ATTGGCGGCA ACGCGTTCGT GACCGAGCCA TCGATGGCGG CAGCGGTCGG CTCCATCGTC TTCGTGGTGG CGGTCGTGGG CGGCATGGGG TCTCTTGTGG GCGCGTTCGT TGCGTCGCTG CTGATCGGTT GCATCCAGAC CTTTGCCGTC ACGCTTGATA TTTCGGTGAC CAGCGTGCTC GGGAAGATCG GTGTCACGCT CAACCCCGAC GTGCCGCTCA TCTCGGTCTG GAACCTGACG ATTGCGCAAG TCGCACCGGT GCTGCCGTAT CTGCTGCTGG TGCTGATGCT GATCTTCCGC CCGCGTGGGC TGATGGGTAC GCGGGAGAGC TAA
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Protein sequence | MRSPVLRRIC WKGCSVEFLV INLLNGISYG LLLFMLSSGL TLIFSMMGVL NFAHASFYML GAYFAYVVSG YLGFWTALIV APLLVGALGA VVERFGLRTV HRYGHVAELL FTFGLAYLIE EGVKLVWGLP AVPYRVPDAL DGPLFTLFTS SFPKYRAFMM LVSLLMLVGI FLLLTRTRIG LVIQAALTHP DMVEALGHNV PRVFMLVFGG GCALAGLAGV IGGNAFVTEP SMAAAVGSIV FVVAVVGGMG SLVGAFVASL LIGCIQTFAV TLDISVTSVL GKIGVTLNPD VPLISVWNLT IAQVAPVLPY LLLVLMLIFR PRGLMGTRES
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