| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1449 |
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| Symbol | |
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| ID | 6286246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1539448 |
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| End bp | 1540971 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642625016 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001899022 |
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| Protein GI | 187928535 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0168502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00111111 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATACAC CCATCACCCC CACCGGGCTC GAAGCCCAAT CCGAACTGCG CCGACGCCTG
CGCTCGCGCC ACCTGATGAT GATCGCCCTG GGCGGCGCCA TCGGCACGGG GCTGTTCGTC
GCGTCCGGCG CGTCCATTGC CCAGGCCGGC CCCGGCGGCG CACTGCTGAC CTACACGCTG
ATCGGCGTGA TGGTCTATTG CCTGATGACG AGTCTTGGCG AGCTGGCGGT ACATCTGCCC
GTCTCGGGTT CGTTCGTGAC TTACAGCCGC CTGTATGTCG AAGAAGGCTT TGGCTTTGCG
CTGGGATGGA ACTACTGGTT TGCACTGGCC GTGTCCGTTG CGGTGGAATT GGCGGCCGCG
CAACTCGTGA TGAAGTACTG GTTCCCGGGC ATCTCGGGCA TGGTCTGGAG CGCCGCATTC
CTGCTGCTGA TGTTTGGCCT CAACGCCTTC TCCGTGCGCG GCTTCGGCGA GGCGGAATAC
TGGTTCTCGA TGATCAAGGT GGTGACCATC ATCGTGTTCC TGCTGATCGG CCTGGCGATG
ATCTTCGGCA TCATGCACGG CGGCCCACAG TCGGGTTGGC AGAACTTCAC CGTGGGTGAT
GCGCCGTTCG TGGGCGGTGT GCCTGCCATG GTGGGTGTGG CGATGATTGC CGGGTTCTCG
TTCCAGGGTG TCGAAACCAT CGGCGTGGCC GCCGGCGAGG CGGAGAACCC CTCCCGCACG
ATCCCCCGCG CCATCCGCCA GACGTTCTGG CGCATTCTGC TGTTCTATGT GCTGGCGATC
CTGATCATTG GCGTGCTGCT GCCATACACC GACCCGAACC TGCTGCGCAA TGAAGCGACG
GACGTCGGCG TCAGCCCGTT TGCGCTGGTG TTCCAGCACG CGGGCCTCGC GTTTGCGGCC
GGTATGATGA ATGCGGTGGT GCTGACCGCG CTGCTGTCGT CCGGCACGTC GAGCCTCTAT
GTGTCGACGC GGATTCTGTA CGATTTGGCG CTCGAAGGCC AAGCGCCGCG CTGGTTTGCC
AAGGTATCTA CCAATGGCGT GCCGCATCGC GCGCTGCTTT CCACGTCCGC TGTTGGCGCG
CTGTGCTTCT TCAGCTCTTT GTTTGGCGAT CAGGTGGTCT ACCTGTGGCT GCTGAATACA
TCTGCGGTGA CATGCTTCAT CGCCTGGTTC GGCATTGCGC TGGCGCACTA CCGGTTCCGC
AAGGGGTTCA CGAGCCAGGG CCATTCAGTG GAGCAACTGG CGTATCGGTC GCCGTTCTTC
CCATTCGGGC CGATCATGGT GGCGATCCTG TGCGCGGTGA TCATCCTTGG GCAGAACACC
AAGGCACTGT TTGCACCGGT GGACAACTTC GGCGCCTTCA TCGCAACGTA CTGCGGTGTG
ATTCTGTTCG TGGCGATCTG GCTGGCTTAC CGCTGGAAAT TCAAGACGCG ATTCGTGAAG
TACACCGAGA TGCAGTTCAG CCCGGCGCAT CTGCAACAAC CCGAACCTAC CAACGCCACT
GCGACGGGCG TGGTTGCCAA CTAG
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| Protein sequence | MHTPITPTGL EAQSELRRRL RSRHLMMIAL GGAIGTGLFV ASGASIAQAG PGGALLTYTL
IGVMVYCLMT SLGELAVHLP VSGSFVTYSR LYVEEGFGFA LGWNYWFALA VSVAVELAAA
QLVMKYWFPG ISGMVWSAAF LLLMFGLNAF SVRGFGEAEY WFSMIKVVTI IVFLLIGLAM
IFGIMHGGPQ SGWQNFTVGD APFVGGVPAM VGVAMIAGFS FQGVETIGVA AGEAENPSRT
IPRAIRQTFW RILLFYVLAI LIIGVLLPYT DPNLLRNEAT DVGVSPFALV FQHAGLAFAA
GMMNAVVLTA LLSSGTSSLY VSTRILYDLA LEGQAPRWFA KVSTNGVPHR ALLSTSAVGA
LCFFSSLFGD QVVYLWLLNT SAVTCFIAWF GIALAHYRFR KGFTSQGHSV EQLAYRSPFF
PFGPIMVAIL CAVIILGQNT KALFAPVDNF GAFIATYCGV ILFVAIWLAY RWKFKTRFVK
YTEMQFSPAH LQQPEPTNAT ATGVVAN
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