| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1448 |
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| Symbol | |
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| ID | 6286245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1537832 |
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| End bp | 1539367 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642625015 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001899021 |
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| Protein GI | 187928534 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0115525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00101809 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGAAC ACGCTACCCC GTCTTCAGAG ACGCCGGGCT TGCGCCGCAC CTTGCGCGCG
CGCCATCTCA CCATGATCGC CATCGGCGGG TCGATCGGCA CCGGGCTCTT CGTGGCCTCG
GGGGCGTCGG TCTCGCAGGC CGGCCCCGGA GGCGCCCTCG CCGCTTACAT CCTGATCGGG
GCGATGGTCT ACTTTCTGAT GACCAGCCTG GGCGAACTTG CCGCCTATAT GCCGGTTTCC
GGGTCCTTCG CCACCTACGG CGCGCTGTAC GTGGACGAAG GCTTCGGCTT CGCGCTCGGC
TGGAACTATT GGTACAACTG GGCCGTAACG ATTGCCGTTG AACTGGCCGC CGCACAGCTC
GTCATGCATT ACTGGTTTCC CGATGTGCCG GGCGTGCTGT GGAGCGCCGT GTTCCTCGCC
ATCATGTTCC TGCTCAACGC CATCTCGGTG CGCGGCTTTG GCGAGGCGGA ATACTGGTTC
GCGCTCATCA AGGTCGTTAC GGTCATCTTC TTTATCGGCA TTGGCCTGGC GATGATCTTC
GGGATCATGA AGGGCGGTCC GCAATCGGGC CTGCAGAACC TGACGATCGG TGATGCGCCG
TTCGTGGGTG GGCTGCCGGC GATGATCGGC GTGGCGATGA TCGCCGGGTT CTCGTTCCAG
GGGACGGAGC TGATTGGCGT GGCGGCCGGC GAATCGGCCG ACCCGGCGCG CACCATTCCA
CGTGCGGTCA AACAGGTGTT CTGGCGGATC CTGCTGTTCT ACGTGCTGGC GATCTTCATC
ATCGGCCTGC TGGTGCCGTA CACCGATCCG AATCTGTTGT CGACGGAAGT CACCAACATT
GGCGTGAGCC CGTTCACGCT GGTGTTCAAG CATGCTGGCC TGGCCTTTGC CGCCGGGCTG
ATGAATGCGG TGATCCTGAC CGCGGTGCTG TCGGCGGGCA ACTCGGGCAT GTATGCATCC
ACGCGCATGC TCTACAACCT GGCCACTGAG GGCCGCGCGC CGCGTATCTT TGCGCGACTC
ACCCAGAACG GTGTGCCGCG CAATGCACTA CTGGCCACGA CCGCCGTTGG CGCGCTATGT
TTCCTGAGTT CGCTGTTTGG CGACAAGACG GTCTACCTGT GGCTGCTGAA CACCTCTGGC
ATGACCGGCT TCGTGGCGTG GCTTGGGATT GCCGTGAGCC ACTATCGCTT CCGCAAGGGA
CTCGTGGCGC AGGGGCACGA TCCGGCGCAG TTGCCGTACC GCTCCAGGTT CTTCCCATAT
GGCCCGTTGT TCGCGTTCGG GTTGTGCCTG GTCATCACGC TGGGCCAGAA CTACCAGGCG
TTCACCAGCG GCACCGTCGA TTGGCCGGCG GTGATCGCCA CGTACATCGG CATCCCGGTC
TTCTTCCTGA TCTGGATCGG CTACCGGCTG GTGCGTGGCG GCGGCATTGT CCGTTACCCG
GACATGCACT TCCCGCGCCC GCCCGTGTTG CGCGATTCGC TGGCCGGCCA AGACCCCGGC
CCCGAATTGC CGATCGTGGC AAACAGTACA CAGTAA
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| Protein sequence | MSEHATPSSE TPGLRRTLRA RHLTMIAIGG SIGTGLFVAS GASVSQAGPG GALAAYILIG
AMVYFLMTSL GELAAYMPVS GSFATYGALY VDEGFGFALG WNYWYNWAVT IAVELAAAQL
VMHYWFPDVP GVLWSAVFLA IMFLLNAISV RGFGEAEYWF ALIKVVTVIF FIGIGLAMIF
GIMKGGPQSG LQNLTIGDAP FVGGLPAMIG VAMIAGFSFQ GTELIGVAAG ESADPARTIP
RAVKQVFWRI LLFYVLAIFI IGLLVPYTDP NLLSTEVTNI GVSPFTLVFK HAGLAFAAGL
MNAVILTAVL SAGNSGMYAS TRMLYNLATE GRAPRIFARL TQNGVPRNAL LATTAVGALC
FLSSLFGDKT VYLWLLNTSG MTGFVAWLGI AVSHYRFRKG LVAQGHDPAQ LPYRSRFFPY
GPLFAFGLCL VITLGQNYQA FTSGTVDWPA VIATYIGIPV FFLIWIGYRL VRGGGIVRYP
DMHFPRPPVL RDSLAGQDPG PELPIVANST Q
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