Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1447 |
Symbol | |
ID | 6286244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1535391 |
End bp | 1537472 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625014 |
Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
Protein accession | YP_001899020 |
Protein GI | 187928533 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.16655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00919085 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGCGG AGTACAAGGT CCAGGACGGC GTTGCCGTCA TCACGCTCAG CAACCCGCCC GTCAACGGCC TTGGCCACTC CACGCGCCTG GGCATCGTTG AAGGCATGGT GAAAGCGGGC GACGACGCCA ACGTCAAGGC CATCGTGATC ACCGGTGCGG GCAAGGCCTT CTCGGGCGGC GCCGATATCC GCGAGTTCAA CACGCCCAAG GCCACGCAAG AGCCGACGCT GCACGCTGTC ATCAAGGCAG TCGAGTCGAG CAGCAAGCCG GTCGTGGCGG CCATCCATTC GGTGGCGATG GGCGGCGGGC TGGAACTGGC GATGGGCTGC CATTTCCGCG TGGCCGCACC AGGCGCACAA ATTGCGCTTC CCGAGGTCAA GCTGGGGATT CTGCCGGGCG CGGGCGGTAC GCAACGCCTG CCGCGCGCAA TCGGCCTGGA GCCGGCGCTG AACATGATCG TTTCCGGCAA CGCCATCCCG TCGGAAAAGC TCGCCAAGAG CGGTCTGTTC GACCAGATGA TCGAAGGTGA CCTGATGGCC GGTGCCATCG ATTTCGCACT GAAGGCCGCA GCCGAGGGCA AGCTGCCGAA GCTGCGCGAT CGCAAGGTCG AGCACGACAA TCCGCAAGGT TTCCTGCAAT TTGCGCGCAA CACCGTCGCG GCCGTCGCCA AGAACTTCCC GGCGCCGGGC AAGTGCGTTG ACGCCGTGCA GGCCGCCGTG GAAAAGCGTT TTGACGACGG CATCAAGTTT GAACGCGACC TGTTCATCGA ACTGGTGAAT ACGTCCAAAT CGCGCGCACT GCGCCACGCC TTCTTTGGTG AACGCGCTGC AAGCAAGATC CCCGATGTGC CGGAAGATAC GCCAGTGCGC AAGGTGGAGA AGGTTGCCGT GATCGGCGCT GGCACGATGG GCGGCGGCAT CTCGATGAAC TTCCTCAACG CAGGCATTCC GGTCACGATG CTGGAAACCA AGCAGGAAGC GCTGGACCGC GGCGTCGCCA CCATCCGCAA GAACTACGAG AACAGCGCCA AGAAGGGCAA GCTCACGCAA GAGAAGGTCG AGCAGCGCAT GGCCCTGCTG ACCCCGACGC TGTCCTACGA CGACATCAAG GATGCTGACC TCGTCATCGA GGCCGTCTTT GAAGAAATGG GCGTCAAGGA AGTCGTGTTC AAGAAGCTGG ACGAAGTCGT CAAGCAGGGC GCAATCCTGG CGTCGAACAC CTCCACGCTG GACGTCGACA AGATCGCCAG CTTCACCAAG CGCCCGCAAG ACGTTGTCGG CATGCACTTC TTCAGCCCGG CCAACGTGAT GAAGTTGCTG GAAGTCGTGC GCGGCAAGGA CACCGCCAAG GACGTGCTGG CCACCGTCAT GAAGCTGGCC AAGGCCATCA AGAAGACGGC CGTTGTTTCC GGCGTGTGTG ACGGCTTCAT CGGCAACCGC ATGATCGAGC AGTACAGCCG CCAGGCCGGC TACCTGCTGG ACGAAGGCGC GCTGCCCGAG CAGGTCGACA AGGCCATCGA GAAGTTCGGC TTTGCCATGG GCCCGTTCCG CATGGGCGAT CTGGCCGGCA ACGACATCGG CTGGGCCATC CGCAAGCGCC GCGCCGTGGA CAAGCCGGAC ATCGTCTATT CGAAGACCGC CGATCTGCTG TGCGAGATGG GCCGCTTTGG TCAGAAGACC GGCGGCGGCT GGTACGACTA CAAGGCGGGC GACCGCAAGC CGTATCCGAA CCAGCAGGTC AACGACATGA TCGTCCAGCA CTCGAAGGAT CTGGGCATCA CGCGCCGCAA GATTTCGGAC GAGGAAATCG TCGAGCGCCT GGTGTTCGCG CTGGTCAACG AAGGCGCGAA GATCCTGGAA GAGGGCATTG CCTCCAAGGC TTCCGACATC GACATGGTGT ACCTGACCGG CTACGGCTTC CCGCTGTTCC GCGGTGGCCC GATGCTCTAC GCAGACACGG TCGGCCTGTA CAACGTCGCG CAAGCCATGC ACCGCTACAG CAAGGGCTAC CACGGTGAAG CGTGGAAGGT TGCCCCGCTG CTGCAGAAGC TGGCCGATGA AGGCAAGGGC TTTAATGGCT GA
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Protein sequence | MTAEYKVQDG VAVITLSNPP VNGLGHSTRL GIVEGMVKAG DDANVKAIVI TGAGKAFSGG ADIREFNTPK ATQEPTLHAV IKAVESSSKP VVAAIHSVAM GGGLELAMGC HFRVAAPGAQ IALPEVKLGI LPGAGGTQRL PRAIGLEPAL NMIVSGNAIP SEKLAKSGLF DQMIEGDLMA GAIDFALKAA AEGKLPKLRD RKVEHDNPQG FLQFARNTVA AVAKNFPAPG KCVDAVQAAV EKRFDDGIKF ERDLFIELVN TSKSRALRHA FFGERAASKI PDVPEDTPVR KVEKVAVIGA GTMGGGISMN FLNAGIPVTM LETKQEALDR GVATIRKNYE NSAKKGKLTQ EKVEQRMALL TPTLSYDDIK DADLVIEAVF EEMGVKEVVF KKLDEVVKQG AILASNTSTL DVDKIASFTK RPQDVVGMHF FSPANVMKLL EVVRGKDTAK DVLATVMKLA KAIKKTAVVS GVCDGFIGNR MIEQYSRQAG YLLDEGALPE QVDKAIEKFG FAMGPFRMGD LAGNDIGWAI RKRRAVDKPD IVYSKTADLL CEMGRFGQKT GGGWYDYKAG DRKPYPNQQV NDMIVQHSKD LGITRRKISD EEIVERLVFA LVNEGAKILE EGIASKASDI DMVYLTGYGF PLFRGGPMLY ADTVGLYNVA QAMHRYSKGY HGEAWKVAPL LQKLADEGKG FNG
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