| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1445 |
|---|
| Symbol | |
|---|
| ID | 6286734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1533473 |
|---|
| End bp | 1534651 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642625012 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001899018 |
|---|
| Protein GI | 187928531 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0121252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAG CAGTCATCGT TTCCACCGCA CGTACCGGCC TGGCCAAGAG CTGGAAGGGC
GCCTTCAACA TGACGCACGG CGCCACGCTG GGCGGCCATG CGGTTCAGCA CGCCATCGAG
CGCGCCAAGA TCGAGCCGGG CGAAGTGGAA GACATCCTGA TGGGCTGTGC GAACCCGGAA
GGCGCAACGG GCGCCAACAT CGCTCGCCAG ATCGCCCTGC GTGCCGGCTG CCCCGTGACC
GTGCCGGGCG CGACCGTCAA CCGCTTCTGC TCGTCGGGCC TGCAGACCAT CGCCATGGCG
GCGCAGCGTG TGATTGCCGA TGAAGGCGAC ATCTTCGTGG CGGGCGGCGT GGAATCCATC
TCGTGCGTGC AGCAGGAAAT GAACCGCCAC ATGATGACCG AAGGCTGGCT CAACAAGCAC
AAGCCGGAAA TCTACTGGAG CATGCTGCAG ACCGCCGAGA ACGTCGCCAA GCGCTACAAC
ATCGCCAAGG AGCGCATGGA CGAGTACGGC GTGCAAAGCC AGCAGCGCGC CGCTGCCGCC
GCTGCCGCCG GCAAGTTCGA CGACGAAATC GTCCCGATGA CCACGGTGAT GGGCGTGGCC
GATGCCAAGA CCGGCCAGCT CATGACGCGC GAAGTCACGA TCTCAGCCGA CGAAGGCATT
CGCGCTGACA CCACGCTCGA AGGCGTGTCG AAGATTCGCA CGGCCATGCC GGGCGGCGTG
ATCACGGCCG GCAACGCCAG CCAATTCTCC GACGGCGCAT CCGCTGCTGT GGTCATGAAT
GGCAAGGTGG CAGCCGCAAA GGGCCTGCAG CCGCTCGGCG TGTTCCGCGG CTTCGCCGTG
GCCGGCTGCG AGCCGGACGA AATGGGCATC GGCCCCGTCT TTGCCGTGCC CAAGCTGCTG
AAGAAGGCGG GTCTCAAGGT TGAAGACATT GGCCTGTGGG AACTGAACGA AGCGTTTGCT
GTGCAGGTGC TGTACTGCGC AGACAAGCTG GGCATCCCGA TGGACCGCCT GAACGTCAAC
GGCGGCGCCA TCGCCGTGGG CCATCCGTAC GGCGTGTCGG GCGCACGCCT GGTCGGCCAC
GCGCTGATCG AAGGCAAGCG CCGCGGCGTC AAGTACGTGG TCGTGACCAT GTGCATTGGC
GGCGGCCAAG GCGCAGCCGG CCTGTTCGAG GTGCTCTAA
|
|---|
| Protein sequence | MTEAVIVSTA RTGLAKSWKG AFNMTHGATL GGHAVQHAIE RAKIEPGEVE DILMGCANPE
GATGANIARQ IALRAGCPVT VPGATVNRFC SSGLQTIAMA AQRVIADEGD IFVAGGVESI
SCVQQEMNRH MMTEGWLNKH KPEIYWSMLQ TAENVAKRYN IAKERMDEYG VQSQQRAAAA
AAAGKFDDEI VPMTTVMGVA DAKTGQLMTR EVTISADEGI RADTTLEGVS KIRTAMPGGV
ITAGNASQFS DGASAAVVMN GKVAAAKGLQ PLGVFRGFAV AGCEPDEMGI GPVFAVPKLL
KKAGLKVEDI GLWELNEAFA VQVLYCADKL GIPMDRLNVN GGAIAVGHPY GVSGARLVGH
ALIEGKRRGV KYVVVTMCIG GGQGAAGLFE VL
|
|---|
| |