Gene Rpic_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1440 
Symbol 
ID6289126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1527468 
End bp1528478 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content64% 
IMG OID642625007 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_001899013 
Protein GI187928526 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00731685 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGAAGA CCTATCAGCG CATCGTTCTG GCTTCGCGCC CGCAAGGGGC CGTGACGCCC 
GACAATTTCC GCCTGGAGAC GGTGGACATC CCCGAGCTGC AGGACGGCCA GGTGCTGGTG
CGCAACCATT TCCTGTCGCT CGATCCGTAC ATGCGCGGCC GCATGAACGA CAGCAAGTCG
TATGCACAAC CGCAGCCGCT GGATGAAGTG ATGATCGGCG GCACGGTGGG CGTGGTGGAA
GCGTCCAAGA ACCCGTCGTT TGCCGTGGGC GACAACGTCG TCGGCATGTT CGGCTGGCAG
GAAATGGGCG TGTCGGACGG CCGCGGCATC CAGAAGGTCG ATACGCGCCA CATTCCGCTG
TCGGCGTATC TCGGCTCGGT GGGCATGCCG GGCGTGACGG CGTGGTATGG CCTGAACAAG
ATCATGCTGC CGAAGCCCGG CCAGACCGTG GCCGTGAGCG CCGCTTCGGG CGCGGTGGGG
AGCGTGGTCG GCCAGCTTGC CAAGCTCAAG GGCTGCCGCG TGGTGGGCTT TGCCGGTGGC
AAGGACAAGT GCGATTACGT GGTCAACGAA CTGGGCTTTG ACGCCTGCAT CGACTACAAG
GCCGCCAGTG ACGCGAAAGA GCTGTACAAG ATGCTCAAGG AAGCGACGCC CGACGGTATC
GATTCGTACT TTGAGAACGT CGGTGGCGCG ATCCTGGATG CGGTGCTCTC CCGCATGAAC
GCGTTCGGCC GCATCGCCAT GTGCGGCATG ATCGCCGGCT ACGACGGTCA GCCGCTGCCG
CTGCAGAACC CGCAGTTGAT CCTGGTGTCG CGCCTGACCA TCGAGGGCTT CATCGTCTCC
GAACACATGG ACGTGTGGCC GGAAGCACTG CGCGAGCTGG GCGGCTTCGT GGCGCAGGGC
AAGCTGAAAT TCCGCGAGAG CGTGGCACAG GGCTTGGCGA GCGCACCGGA AGCATTCATG
GGCCTGCTCA AGGGCAAGAA CTTCGGCAAG CAACTCGTCA AGCTGGTTTG A
 
Protein sequence
MSKTYQRIVL ASRPQGAVTP DNFRLETVDI PELQDGQVLV RNHFLSLDPY MRGRMNDSKS 
YAQPQPLDEV MIGGTVGVVE ASKNPSFAVG DNVVGMFGWQ EMGVSDGRGI QKVDTRHIPL
SAYLGSVGMP GVTAWYGLNK IMLPKPGQTV AVSAASGAVG SVVGQLAKLK GCRVVGFAGG
KDKCDYVVNE LGFDACIDYK AASDAKELYK MLKEATPDGI DSYFENVGGA ILDAVLSRMN
AFGRIAMCGM IAGYDGQPLP LQNPQLILVS RLTIEGFIVS EHMDVWPEAL RELGGFVAQG
KLKFRESVAQ GLASAPEAFM GLLKGKNFGK QLVKLV