Gene Rpic_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1429 
Symbol 
ID6287664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1517719 
End bp1518534 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content68% 
IMG OID642624996 
Productprotein of unknown function DUF833 
Protein accessionYP_001899002 
Protein GI187928515 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.235139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.119665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTTGA TTCTCACGGC CTGGCACGCC CACCCCGCCT ACGCGCTGGT GGTGGCCGCC 
AACCGGGACG AATTCTATGA TCGCCCTGCC GCGCCGCTGG CGTGGTGGAG CGACGCGCCC
AATGTCCTGG CCGGGCGTGA CATGGCCCAG GTGGTCGGTC ACGCAGGCAC GTGGATGGGC
ATGACGCGTG ACGGCCGCTT TGCCGCGCTG ACAAACTACC GCGCGCCGTC CGAGCGCCGG
CCCGATGCAC GCTCGCGCGG GGAACTCGTC TCGAATTTCC TGATGGCGGA CGACATGTCG
GTGCCCGCCT ATCTCGATAG CCTCGCCGCA CGCGACCGTG CCTACAACGG CTACAACCTG
CTGACCGCCA CGCGCGACGA ACTCTGGTGG ACGAGCAACC GCGCCGAAGC GCCGCGCAAG
CTCGCGCCCG GCCTTTACGG GCTGTCCAAC GCATTGCTCG ATACGCCGTG GTTCAAGGTG
CGGCATCGCA TGGCTGCCTT TGCCGAAGCG CTGGCCGCAG ATACGGGCCG GCACGGCAAC
GCGCTGGACG TGGCGCGCTA TCTCGATCTG CTATCGGAAG CGCGCGAAGC ACCGACCGGC
GCTTTGCCCG CCACAGGCGT GGCCCCTGAA TGGGAGAAGC TGCTATCCGC CGCCTTCATC
CGCTCGCCGC GCTACGGCAC GCGTGCCAGC ACCATCCTGC GCATCCGCCA CGACGGGTGC
TTTGACGTGA CCGAGCGCCG CTTCGACGCC CAGGGCCAGA TTGGCGAAAC GCGCTATCTC
GGCGTGCTCG ATACCGTCAC GCACGCCGAT ACCTAG
 
Protein sequence
MCLILTAWHA HPAYALVVAA NRDEFYDRPA APLAWWSDAP NVLAGRDMAQ VVGHAGTWMG 
MTRDGRFAAL TNYRAPSERR PDARSRGELV SNFLMADDMS VPAYLDSLAA RDRAYNGYNL
LTATRDELWW TSNRAEAPRK LAPGLYGLSN ALLDTPWFKV RHRMAAFAEA LAADTGRHGN
ALDVARYLDL LSEAREAPTG ALPATGVAPE WEKLLSAAFI RSPRYGTRAS TILRIRHDGC
FDVTERRFDA QGQIGETRYL GVLDTVTHAD T