Gene Rpic_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1426 
Symbol 
ID6287661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1515115 
End bp1516113 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content64% 
IMG OID642624993 
Productaminodeoxychorismate lyase 
Protein accessionYP_001898999 
Protein GI187928512 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.219736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.242343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCTT TTCTCAAACG CTTGGTCCTG CTGGCCATCC TGATTGTGCT GGCGGCGGCA 
GGCGGCGTGG TGTGGTGGGC CCAGCAACCG GTGAGCCTGG CGGCGTCGCC GCTGGAGGTG
GTGATCAAAC CGAACTCGAG CGTGATCTCG GTCGGCAAGC AGCTTGCGAG CGCCGGTGTG
GGCGTGCAAC CGCAGTTGTT CTCGCTGGTG GCGCGCGCGA CAGGCAACGC CAAGAGCCTG
AAAGCCGGCG GCTATGCGCT GGAAACCGGC GCGACGCCCA TGTCCATCTT GGACAAGATG
GCGCGCGGCG ATGTCACGCA TTACGTGGTC ACCGTCATCG AGGGCTGGTC GATGCGGCAG
ATGCGGGCGG TGGTGGACGC AGAGCCTGCG CTCAAGCACG ACACGGCCGG CATGTCCGAT
GCAGATCTGA TGCGCAAGAT TGGGGCGCCT GAAACCAATC CGGAAGGCCT GTTCTTTCCC
GACACCTACC TCTTCGCACG GGGCAGCAGC GACGTGGAGC TGTACCGTCA CGCGTACCAG
GCCATGCAGA AGCGTCTGAA CGATGCCTGG GCCAAGCGCT CACTGGATCT GCCGTACAAG
ACGCCGTACG AAGCGCTGAC CATGGCCTCC ATCATCGAGA AGGAGACCGG CCAGAAGCTG
GAACGGCCGA TGATTGCCGC CGTGTTCGTC AACCGCCTGC GCAAGAACAT GCTGCTGCAG
ACCGACCCGA CGGTCATCTA CGGCATCGGT GCCGGCTTTG ACGGCAATTT GCGCAAGCGC
GACCTGCAGA CCGACACGCC GTACAACACC TACACGCGCA CCGGCCTGCC GCCCACGCCA
ATCGCGCTGC CGGGCATGGC GTCGCTGCAG GCGGCACTGA ACCCGGCACC GTCCGACGCG
CTGTATTTCG TGGCGCGCGG CGACGGCAGC AGCCAGTTTT CGACCAACCT GACGGACCAC
AACCGGGCCG TCAACAAATA TCAGCGCGGC CAACCATGA
 
Protein sequence
MLSFLKRLVL LAILIVLAAA GGVVWWAQQP VSLAASPLEV VIKPNSSVIS VGKQLASAGV 
GVQPQLFSLV ARATGNAKSL KAGGYALETG ATPMSILDKM ARGDVTHYVV TVIEGWSMRQ
MRAVVDAEPA LKHDTAGMSD ADLMRKIGAP ETNPEGLFFP DTYLFARGSS DVELYRHAYQ
AMQKRLNDAW AKRSLDLPYK TPYEALTMAS IIEKETGQKL ERPMIAAVFV NRLRKNMLLQ
TDPTVIYGIG AGFDGNLRKR DLQTDTPYNT YTRTGLPPTP IALPGMASLQ AALNPAPSDA
LYFVARGDGS SQFSTNLTDH NRAVNKYQRG QP